PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
Reset
Gene Pathway Family Confidence Status Best Target
Pnig01G0003120 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig01G0003130 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig01G0006560 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig01G0013080 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig01G0013090 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig01G0013100 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig01G0013130 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig01G0013140 Terpenoid CYP76 low borderline CYP76__00007__sp_A0A1D8QMD2_C76K7_ROSOF
Pnig01G0013820 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig01G0013850 Terpenoid CYP76 medium borderline CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM
Pnig01G0018740 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig01G0018760 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig01G0018770 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig01G0018790 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig01G0018810 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Pnig01G0018860 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig01G0018920 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig01G0018940 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig01G0018970 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig01G0018990 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig01G0019160 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig01G0019180 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Pnig01G0022670 Terpenoid CYP76 low borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
Pnig01G0022800 Terpenoid CYP76 low borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
Pnig01G0030240 Terpenoid CYP76 low borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
Pnig01G0030250 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Pnig01G0031430 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig01G0031440 Terpenoid CYP76 medium pass CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT
Pnig01G0031650 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Pnig01G0031660 Terpenoid CYP76 low borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
Pnig01G0032850 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig02G0001680 Terpenoid CYP76 low borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
Pnig02G0001700 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig02G0005220 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig02G0005330 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig02G0005350 Terpenoid CYP76 medium pass CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ
Pnig02G0005360 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig02G0005380 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig02G0005390 Terpenoid CYP76 medium pass CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
Pnig02G0006330 Terpenoid CYP76 medium borderline CYP76__00018__sp_Q69X58_C76M7_ORYSJ
Pnig02G0006340 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig02G0006370 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig02G0006380 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig02G0006400 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig02G0006410 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig02G0006440 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig02G0008670 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig02G0008930 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig02G0009520 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig02G0011790 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO