PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status Best Target
Pnig01G0017200 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig01G0029190 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig01G0032850 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00004__sp_Q5CCK3_C90B2_ORYSJ
Pnig02G0019750 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00003__sp_O64989_C90B1_ARATH
Pnig02G0027910 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00002__sp_I1H7R8_C90B1_BRADI
Pnig03G0004680 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00003__sp_O64989_C90B1_ARATH
Pnig04G0016000 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00003__sp_O64989_C90B1_ARATH
Pnig05G0008200 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig05G0008270 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig06G0018620 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig07G0007530 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig07G0029580 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00002__sp_I1H7R8_C90B1_BRADI
Pnig07G0030290 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00002__sp_I1H7R8_C90B1_BRADI
Pnig08G0005650 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00004__sp_Q5CCK3_C90B2_ORYSJ
Pnig08G0005790 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00004__sp_Q5CCK3_C90B2_ORYSJ
Pnig08G0006530 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00004__sp_Q5CCK3_C90B2_ORYSJ
Pnig08G0006570 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00002__sp_I1H7R8_C90B1_BRADI
Pnig08G0006680 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00004__sp_Q5CCK3_C90B2_ORYSJ
Pnig08G0006780 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00004__sp_Q5CCK3_C90B2_ORYSJ
Pnig08G0030270 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00003__sp_O64989_C90B1_ARATH
Pnig09G0017120 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig10G0017500 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig12G0007920 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig12G0010530 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00003__sp_O64989_C90B1_ARATH
Pnig12G0011740 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00003__sp_O64989_C90B1_ARATH
Pnig13G0002450 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig13G0002550 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig14G0013280 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00003__sp_O64989_C90B1_ARATH
Pnig15G0003000 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00004__sp_Q5CCK3_C90B2_ORYSJ
Pnig15G0020890 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00003__sp_O64989_C90B1_ARATH
Pnig15G0022580 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00003__sp_O64989_C90B1_ARATH
Pnig18G0010120 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00002__sp_I1H7R8_C90B1_BRADI
Pnig18G0015320 Steroid DWF4/CYP90B1 low borderline DWF4_CYP90B1__00001__sp_A0A517FNC5_C90G4_PARPY
Pnig22G0011040 Steroid DWF4/CYP90B1 medium borderline DWF4_CYP90B1__00003__sp_O64989_C90B1_ARATH