PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: MPO
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Gene Pathway Family Confidence Status Best Target
Pnig01G0019150 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig02G0006200 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig02G0007110 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig06G0019650 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig08G0017940 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0004380 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0005230 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0005250 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0005270 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0005400 Alkaloid MPO medium pass MPO__00002__sp_A0A1S4BDC4_MPO1_TOBAC
Pnig13G0005420 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0006410 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0006420 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0006470 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig14G0018380 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig20G0005440 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig20G0005450 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig20G0007990 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig22G0017270 Alkaloid MPO low borderline MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig24G0003660 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig26G0008600 Alkaloid MPO low borderline MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
PnigPn390000250 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC