PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ODC
Reset
Gene Pathway Family Confidence Status Best Target
Pnig01G0031890 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0032720 Alkaloid ODC medium pass ODC__00002__sp_E0WN94_ODC_NICGL
Pnig01G0032740 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0032750 Alkaloid ODC low borderline ODC__00002__sp_E0WN94_ODC_NICGL
Pnig01G0032780 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0033660 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0033670 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0033700 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0033740 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0033750 Alkaloid ODC low borderline ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0033780 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0033830 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0034370 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0034380 Alkaloid ODC low borderline ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0034410 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0034470 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0034510 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig13G0017030 Alkaloid ODC medium pass ODC__00002__sp_E0WN94_ODC_NICGL
Pnig13G0017740 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig13G0018830 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig13G0018840 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC