PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
Reset
Gene Pathway Family Confidence Status Best Target
Pnig01G0013850 Flavonoid FNS medium borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig01G0018760 Flavonoid FNS medium borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig01G0018780 Flavonoid FNS medium pass FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig01G0018920 Flavonoid FNS medium borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig01G0018930 Flavonoid FNS medium pass FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig02G0008700 Flavonoid FNS low borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig02G0011790 Flavonoid FNS medium borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig02G0012630 Flavonoid FNS medium borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig02G0015950 Flavonoid FNS medium borderline FNS__00001__sp_E9KBR8_C9B16_SOYBN
Pnig03G0009710 Flavonoid FNS low borderline FNS__00002__sp_P93149_C93B1_GLYEC
Pnig03G0012390 Flavonoid FNS medium borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig03G0012400 Flavonoid FNS low borderline FNS__00001__sp_E9KBR8_C9B16_SOYBN
Pnig03G0012550 Flavonoid FNS low borderline FNS__00001__sp_E9KBR8_C9B16_SOYBN
Pnig03G0017040 Flavonoid FNS medium pass FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig04G0016880 Flavonoid FNS low borderline FNS__00004__sp_Q7XZQ8_FNSI_PETCR
Pnig06G0017250 Flavonoid FNS medium borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig07G0012360 Flavonoid FNS medium borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig08G0002460 Flavonoid FNS medium borderline FNS__00002__sp_P93149_C93B1_GLYEC
Pnig08G0010030 Flavonoid FNS medium borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig08G0023020 Flavonoid FNS low borderline FNS__00003__sp_Q0JFI2_C93G1_ORYSJ
Pnig09G0008650 Flavonoid FNS low borderline FNS__00002__sp_P93149_C93B1_GLYEC
Pnig09G0017120 Flavonoid FNS low borderline FNS__00003__sp_Q0JFI2_C93G1_ORYSJ
Pnig09G0017130 Flavonoid FNS medium pass FNS__00003__sp_Q0JFI2_C93G1_ORYSJ
Pnig09G0022650 Flavonoid FNS medium pass FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig09G0022670 Flavonoid FNS low borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig09G0022720 Flavonoid FNS low borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig09G0022750 Flavonoid FNS low borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig09G0022850 Flavonoid FNS low borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig09G0022980 Flavonoid FNS medium pass FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig09G0023010 Flavonoid FNS low borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig09G0024110 Flavonoid FNS medium borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig09G0024120 Flavonoid FNS medium borderline FNS__00003__sp_Q0JFI2_C93G1_ORYSJ
Pnig12G0014920 Flavonoid FNS low borderline FNS__00004__sp_Q7XZQ8_FNSI_PETCR
Pnig15G0016010 Flavonoid FNS low borderline FNS__00002__sp_P93149_C93B1_GLYEC
Pnig17G0007610 Flavonoid FNS low borderline FNS__00002__sp_P93149_C93B1_GLYEC
Pnig17G0007910 Flavonoid FNS medium pass FNS__00003__sp_Q0JFI2_C93G1_ORYSJ
Pnig17G0009000 Flavonoid FNS medium pass FNS__00003__sp_Q0JFI2_C93G1_ORYSJ
Pnig19G0018780 Flavonoid FNS low borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig20G0007240 Flavonoid FNS medium pass FNS__00001__sp_E9KBR8_C9B16_SOYBN
Pnig20G0018100 Flavonoid FNS medium borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig21G0000370 Flavonoid FNS low borderline FNS__00002__sp_P93149_C93B1_GLYEC
Pnig21G0007910 Flavonoid FNS low borderline FNS__00004__sp_Q7XZQ8_FNSI_PETCR
Pnig21G0013840 Flavonoid FNS low borderline FNS__00005__sp_Q9XGT9_C93B2_GERHY
Pnig21G0014720 Flavonoid FNS low borderline FNS__00001__sp_E9KBR8_C9B16_SOYBN
Pnig24G0004890 Flavonoid FNS low borderline FNS__00003__sp_Q0JFI2_C93G1_ORYSJ