PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Gene Pathway Family Confidence Status Best Target
Pnig19G0003420 Phenylpropanoid C3'H/CYP98A medium pass C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0007610 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0008670 Phenylpropanoid C3'H/CYP98A medium pass C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0009170 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0009190 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0009210 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0009250 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0009280 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0015190 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0015230 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0015290 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0015300 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig20G0004740 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig20G0006320 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig20G0006330 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig20G0018090 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00002__sp_Q9CA60_C98A9_ARATH
Pnig21G0006840 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig21G0006850 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig21G0006890 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig21G0006930 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig22G0009260 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig23G0010430 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00002__sp_Q9CA60_C98A9_ARATH
Pnig24G0004890 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00003__sp_Q9CA61_C98A8_ARATH
Pnig25G0010470 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00003__sp_Q9CA61_C98A8_ARATH
PnigPn410000020 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00003__sp_Q9CA61_C98A8_ARATH