PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
Pnig09G0022170 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022180 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022210 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022220 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022250 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022260 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022290 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022310 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig10G0005650 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig11G0003140 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig12G0014070 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig13G0003120 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig13G0003150 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig13G0003170 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig13G0003210 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig13G0021080 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig14G0007240 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig14G0007570 Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
Pnig14G0018420 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig14G0018430 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig15G0000760 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig17G0015120 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig18G0005700 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig18G0005770 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig18G0005830 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig18G0011860 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig18G0013100 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig18G0019070 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig19G0007470 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig19G0009050 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig19G0009070 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig19G0009160 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig19G0010120 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig19G0011670 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig19G0011720 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig20G0004160 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig20G0007370 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig22G0005540 Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
Pnig22G0007390 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig22G0017320 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig23G0002450 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig23G0002500 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig23G0003330 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig24G0014040 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig24G0014610 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig24G0014630 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig24G0014710 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig24G0014760 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig24G0014840 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PnigPn420000040 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL