PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status Best Target
Pnig20G0015030 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
Pnig20G0015070 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig20G0015090 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
Pnig20G0015110 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
Pnig20G0015180 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
Pnig21G0000920 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig21G0000930 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
Pnig21G0000940 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig21G0001460 Phenylpropanoid COMT medium pass COMT__00004__sp_Q6T1F5_COMT1_AMMMJ
Pnig21G0001470 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
Pnig21G0001480 Phenylpropanoid COMT medium pass COMT__00004__sp_Q6T1F5_COMT1_AMMMJ
Pnig21G0001490 Phenylpropanoid COMT medium pass COMT__00004__sp_Q6T1F5_COMT1_AMMMJ
Pnig21G0001500 Phenylpropanoid COMT medium pass COMT__00004__sp_Q6T1F5_COMT1_AMMMJ
Pnig21G0001510 Phenylpropanoid COMT medium pass COMT__00004__sp_Q6T1F5_COMT1_AMMMJ
Pnig21G0001520 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig21G0001530 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
Pnig21G0001540 Phenylpropanoid COMT medium pass COMT__00004__sp_Q6T1F5_COMT1_AMMMJ
Pnig21G0001550 Phenylpropanoid COMT medium pass COMT__00004__sp_Q6T1F5_COMT1_AMMMJ
Pnig21G0001560 Phenylpropanoid COMT medium pass COMT__00004__sp_Q6T1F5_COMT1_AMMMJ
Pnig21G0007640 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0001660 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0001670 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0001710 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0001770 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0001790 Phenylpropanoid COMT medium pass COMT__00003__sp_Q38J50_FOMT2_WHEAT
Pnig24G0001830 Phenylpropanoid COMT low borderline COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0001840 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0001890 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0001930 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0001940 Phenylpropanoid COMT medium pass COMT__00006__sp_Q84N28_FOMT1_WHEAT
Pnig24G0002200 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0002210 Phenylpropanoid COMT medium pass COMT__00003__sp_Q38J50_FOMT2_WHEAT
Pnig24G0002230 Phenylpropanoid COMT medium pass COMT__00004__sp_Q6T1F5_COMT1_AMMMJ
Pnig24G0002260 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0002270 Phenylpropanoid COMT medium pass COMT__00007__sp_Q9FK25_OMT1_ARATH
Pnig24G0002420 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0002770 Phenylpropanoid COMT medium pass COMT__00006__sp_Q84N28_FOMT1_WHEAT
Pnig24G0002920 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA
Pnig24G0004800 Phenylpropanoid COMT medium pass COMT__00001__sp_P28002_COMT1_MEDSA