PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
Pnig01G0017990 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig01G0018020 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig01G0018040 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig01G0018340 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig02G0011890 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig02G0013350 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
Pnig02G0018880 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig03G0003990 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig03G0004010 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig03G0008080 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pnig03G0013320 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig04G0001980 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pnig05G0011680 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig06G0018140 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig06G0018210 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig06G0018260 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig06G0020130 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig06G0020140 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig06G0020410 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig06G0020420 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig06G0021060 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig07G0003880 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig07G0012220 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig08G0000690 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pnig08G0028790 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig08G0029340 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig09G0008470 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig09G0020210 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pnig11G0009570 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pnig12G0004900 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig12G0009240 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig13G0003360 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig13G0003380 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig13G0003400 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig13G0003410 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig13G0003420 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig13G0003810 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig13G0019320 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig14G0009170 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig14G0009310 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig15G0011120 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig15G0018060 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pnig15G0023560 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig16G0009560 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig16G0009570 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig16G0013790 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pnig17G0011390 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pnig17G0014940 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig19G0008090 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pnig20G0006830 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL