PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
Pnig06G0017250 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig06G0018620 Terpenoid CYP76 low borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
Pnig06G0019900 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig07G0012370 Terpenoid CYP76 low borderline CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ
Pnig07G0017390 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig07G0029080 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Pnig07G0031140 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Pnig07G0031330 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig08G0002100 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig08G0002460 Terpenoid CYP76 low borderline CYP76__00015__sp_P0DKI2_C76AN_BETVU
Pnig08G0002490 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig08G0008320 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig08G0017140 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Pnig08G0017250 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig08G0017270 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig08G0017280 Terpenoid CYP76 medium pass CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM
Pnig08G0019530 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig08G0019560 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig08G0019620 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig08G0019640 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig08G0019660 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig08G0021740 Terpenoid CYP76 medium pass CYP76__00017__sp_Q14T82_C76B9_PETHY
Pnig08G0025480 Terpenoid CYP76 medium pass CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Pnig09G0017120 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig09G0017130 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Pnig09G0022630 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0022640 Terpenoid CYP76 medium borderline CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ
Pnig09G0022650 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig09G0022660 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0022690 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0022700 Terpenoid CYP76 medium pass CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
Pnig09G0022710 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0022720 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig09G0022730 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0022770 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0022780 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0022830 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0022860 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig09G0022960 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0022980 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig09G0023000 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0023010 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig09G0023020 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0023030 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Pnig09G0023040 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig09G0023050 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0023070 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Pnig09G0023090 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0023100 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig09G0023110 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO