PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
Pnig09G0024120 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig10G0010210 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig10G0016440 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig10G0016470 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig10G0016540 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig11G0006450 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
Pnig11G0013180 Terpenoid CYP76 medium borderline CYP76__00007__sp_A0A1D8QMD2_C76K7_ROSOF
Pnig11G0013190 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig11G0013210 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig11G0013230 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig11G0013240 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig11G0013440 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig11G0013460 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig11G0013490 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig12G0002950 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig12G0004040 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig12G0004050 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0004070 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0004080 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig12G0004120 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig12G0011290 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0011360 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig12G0011370 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0011380 Terpenoid CYP76 medium pass CYP76__00024__sp_W0FKI0_DOX1_PERHD
Pnig12G0011390 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig13G0002910 Terpenoid CYP76 medium pass CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
Pnig13G0002960 Terpenoid CYP76 low borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
Pnig13G0004040 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig13G0004200 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Pnig13G0007720 Terpenoid CYP76 low borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Pnig13G0015360 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig13G0016820 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig14G0011510 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig15G0003000 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig15G0003700 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig15G0004370 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig15G0006120 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig15G0006420 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig15G0006700 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig15G0006710 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig15G0010690 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig15G0011030 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig15G0011650 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig15G0011670 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig15G0016010 Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Pnig15G0020330 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig15G0020890 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
Pnig15G0021850 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig15G0021860 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Pnig15G0022580 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT