PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
Pnig15G0025200 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Pnig16G0004000 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig16G0004270 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig16G0005190 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig16G0009420 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig16G0019650 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig16G0020200 Terpenoid CYP76 medium pass CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
Pnig17G0001340 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Pnig17G0001350 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0001360 Terpenoid CYP76 medium borderline CYP76__00007__sp_A0A1D8QMD2_C76K7_ROSOF
Pnig17G0001390 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0001410 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0005200 Terpenoid CYP76 medium pass CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
Pnig17G0005860 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0005870 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig17G0005900 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Pnig17G0007620 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0007900 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0007910 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0007940 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0008690 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0008720 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0008990 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0009000 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0014790 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig17G0017090 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Pnig18G0000350 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig18G0000360 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig18G0001010 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig18G0012250 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig18G0015320 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Pnig19G0003420 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Pnig19G0007610 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0008670 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009170 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009180 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009190 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009200 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig19G0009210 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009220 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig19G0009250 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009270 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009280 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0015190 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig19G0015230 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig19G0015290 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Pnig19G0015300 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig19G0019240 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Pnig20G0004110 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
Pnig20G0004120 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO