PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status Best Target
Pnig01G0003120 Flavonoid F3'H/CYP75B low borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig01G0013090 Flavonoid F3'H/CYP75B medium pass F3H_CYP75B__00003__sp_Q8LM92_C75B4_ORYSJ
Pnig01G0013820 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig01G0018770 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig01G0018940 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig01G0032850 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig02G0001680 Flavonoid F3'H/CYP75B low borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0001700 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00003__sp_Q8LM92_C75B4_ORYSJ
Pnig02G0005330 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0005350 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig02G0005360 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00003__sp_Q8LM92_C75B4_ORYSJ
Pnig02G0005380 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00003__sp_Q8LM92_C75B4_ORYSJ
Pnig02G0005390 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig02G0006330 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0006340 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0006370 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0006380 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0006400 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0006410 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0006440 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0008670 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0013190 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0021940 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0021950 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0021990 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0022430 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0022610 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0022730 Flavonoid F3'H/CYP75B low borderline F3H_CYP75B__00003__sp_Q8LM92_C75B4_ORYSJ
Pnig02G0030510 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig02G0040520 Flavonoid F3'H/CYP75B low borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig03G0004360 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig03G0006020 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig03G0006280 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig03G0019690 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig03G0019700 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig03G0023590 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig03G0023600 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig03G0024450 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig03G0029790 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig04G0024350 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00003__sp_Q8LM92_C75B4_ORYSJ
Pnig04G0026370 Flavonoid F3'H/CYP75B medium pass F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig04G0026380 Flavonoid F3'H/CYP75B low borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig05G0016260 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig05G0028950 Flavonoid F3'H/CYP75B medium pass F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig05G0033380 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig05G0033420 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig06G0014740 Flavonoid F3'H/CYP75B low borderline F3H_CYP75B__00003__sp_Q8LM92_C75B4_ORYSJ
Pnig06G0019900 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig07G0029080 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig07G0031330 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ