PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
Reset
Gene Pathway Family Confidence Status Best Target
Pnig15G0006700 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig15G0006710 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig15G0010690 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig15G0011030 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig15G0011650 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig15G0020330 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig15G0021850 Flavonoid F3'H/CYP75B low borderline F3H_CYP75B__00003__sp_Q8LM92_C75B4_ORYSJ
Pnig15G0023170 Flavonoid F3'H/CYP75B low borderline F3H_CYP75B__00003__sp_Q8LM92_C75B4_ORYSJ
Pnig15G0025200 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig16G0004270 Flavonoid F3'H/CYP75B medium pass F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig16G0005190 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig16G0009420 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig16G0019650 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig17G0001340 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig17G0001360 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00003__sp_Q8LM92_C75B4_ORYSJ
Pnig17G0001390 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig17G0001410 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig17G0005860 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig17G0005870 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig17G0007900 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig17G0008990 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig17G0014790 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig17G0017090 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig18G0015320 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig18G0019570 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig19G0003420 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig19G0007610 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig19G0008670 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig19G0009190 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig19G0009210 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig19G0009280 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig19G0015290 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig19G0019240 Flavonoid F3'H/CYP75B low borderline F3H_CYP75B__00003__sp_Q8LM92_C75B4_ORYSJ
Pnig20G0004110 Flavonoid F3'H/CYP75B medium pass F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig20G0004130 Flavonoid F3'H/CYP75B low borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig20G0004740 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig20G0005320 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig20G0005340 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig20G0006320 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig20G0006330 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig20G0007870 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig21G0006890 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig21G0006930 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig21G0013830 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig21G0014710 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00002__sp_Q7G602_C75B3_ORYSJ
Pnig22G0007560 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig24G0003420 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig24G0003440 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig24G0003570 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC
Pnig25G0015090 Flavonoid F3'H/CYP75B medium borderline F3H_CYP75B__00001__sp_A0A4D6Q415_CYP1_CROXC