PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
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Gene Pathway Family Confidence Status Best Target
Pnig08G0019660 Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0022630 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0022640 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0022660 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0022710 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0022770 Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0022780 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0022830 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0022960 Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0023000 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0023040 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0023050 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0023070 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0023110 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig09G0024120 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig10G0016520 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig10G0016530 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig11G0000450 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig11G0021510 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig12G0008450 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig14G0010120 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig14G0010130 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig15G0003000 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig15G0003700 Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig15G0004370 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig15G0006700 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig15G0006710 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig15G0010690 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig15G0011030 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig15G0011650 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig15G0011670 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig15G0020330 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig15G0025200 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig16G0004000 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig16G0019650 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig17G0005860 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig17G0005870 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig17G0007900 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig17G0007940 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig17G0008990 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig18G0015320 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig18G0019570 Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig18G0019580 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig19G0019240 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig20G0004110 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig20G0004130 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig20G0005320 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig20G0005340 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig20G0007240 Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Pnig20G0007870 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH