PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status Best Target
Pnig09G0022980 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
Pnig09G0023010 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig11G0013160 Alkaloid G8O/G8H medium pass G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
Pnig11G0013500 Alkaloid G8O/G8H medium pass G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig12G0002950 Alkaloid G8O/G8H low borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig12G0004040 Alkaloid G8O/G8H medium pass G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0004050 Alkaloid G8O/G8H medium pass G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0004070 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0004080 Alkaloid G8O/G8H low borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0004120 Alkaloid G8O/G8H medium pass G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0011290 Alkaloid G8O/G8H medium pass G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0011360 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0011370 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig12G0011390 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig13G0005220 Alkaloid G8O/G8H medium pass G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig13G0005280 Alkaloid G8O/G8H medium pass G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig13G0006400 Alkaloid G8O/G8H medium pass G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig13G0006460 Alkaloid G8O/G8H medium pass G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig13G0015360 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig13G0016820 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig15G0004370 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig15G0006120 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig15G0006420 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig15G0006700 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig15G0006710 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig15G0011650 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
Pnig15G0020330 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
Pnig15G0023170 Alkaloid G8O/G8H medium pass G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
Pnig16G0004270 Alkaloid G8O/G8H low borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig16G0009420 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig16G0019650 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig17G0005900 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig17G0014250 Alkaloid G8O/G8H low borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
Pnig17G0017090 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0008670 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009170 Alkaloid G8O/G8H low borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009180 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009190 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009200 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig19G0009210 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009250 Alkaloid G8O/G8H medium pass G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009270 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig19G0009280 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig20G0004740 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig20G0006320 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig20G0006330 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
Pnig21G0006840 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig21G0006850 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig21G0006890 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
Pnig21G0006930 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO