PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
Pnig01G0002810 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0002820 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0002980 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0002990 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0006490 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009380 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009390 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009420 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009460 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009470 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009490 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009510 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009520 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009540 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009560 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009580 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009610 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009630 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009640 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009680 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009710 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009730 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009810 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009830 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009850 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009860 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009880 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009890 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009910 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009930 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009940 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009950 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0009970 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Pnig01G0009990 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Pnig01G0010010 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010030 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010050 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010060 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010070 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010080 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010090 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010140 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010150 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010170 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010190 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Pnig01G0010200 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010210 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010230 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010250 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pnig01G0010270 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD