PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
Pnig23G0003310 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig23G0003330 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Pnig24G0013940 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0013980 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014020 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014030 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014040 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014060 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014610 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014630 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014650 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014660 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014680 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014710 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014740 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014750 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014760 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014780 Alkaloid GES low borderline GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014810 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014820 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014830 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014840 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pnig24G0014860 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
Pnig26G0011300 Alkaloid GES low borderline GES__00007__sp_Q6USK1_GERS_OCIBA
Pnig26G0012760 Alkaloid GES low borderline GES__00007__sp_Q6USK1_GERS_OCIBA