PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
Reset
Gene Pathway Family Confidence Status Best Target
Pnig01G0012490 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig01G0012510 Alkaloid NMT medium pass NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
Pnig01G0012520 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig01G0012530 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig01G0012570 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig01G0019570 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Pnig01G0019840 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
Pnig01G0023570 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig01G0023580 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig01G0032310 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
Pnig01G0038350 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pnig01G0038920 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Pnig01G0039560 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Pnig02G0000070 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
Pnig02G0004450 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
Pnig02G0005190 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pnig02G0006590 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pnig02G0012750 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pnig02G0016830 Alkaloid NMT low borderline NMT__00034__sp_Q5VN06_CLF_ORYSJ
Pnig02G0030460 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pnig02G0030470 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pnig02G0030500 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pnig02G0038230 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
Pnig03G0003750 Alkaloid NMT medium borderline NMT__00010__sp_A4GE70_DXMT1_COFCA
Pnig03G0009050 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Pnig03G0016120 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pnig03G0016410 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pnig03G0018930 Alkaloid NMT medium pass NMT__00062__sp_Q9SCP7_NAMT1_ARATH
Pnig03G0019060 Alkaloid NMT low borderline NMT__00018__sp_I1M2U5_NAMT1_SOYBN
Pnig03G0031250 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pnig04G0000110 Alkaloid NMT low borderline NMT__00020__sp_O23372_ATXR3_ARATH
Pnig04G0010400 Alkaloid NMT medium pass NMT__00050__sp_Q944H0_PEAM2_ARATH
Pnig04G0033750 Alkaloid NMT medium pass NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig05G0005820 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
Pnig05G0007540 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Pnig05G0009850 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
Pnig05G0009860 Alkaloid NMT low borderline NMT__00055__sp_Q9FNC7_SUVR2_ARATH
Pnig05G0016310 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pnig05G0022640 Alkaloid NMT medium pass NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Pnig05G0023280 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
Pnig05G0023300 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig05G0028810 Alkaloid NMT medium borderline NMT__00014__sp_C3SBW0_PNMT_THLFG
Pnig05G0028840 Alkaloid NMT medium borderline NMT__00014__sp_C3SBW0_PNMT_THLFG
Pnig05G0032080 Alkaloid NMT low borderline NMT__00014__sp_C3SBW0_PNMT_THLFG
Pnig05G0032250 Alkaloid NMT medium borderline NMT__00014__sp_C3SBW0_PNMT_THLFG
Pnig06G0001700 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
Pnig06G0016750 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
Pnig06G0017230 Alkaloid NMT medium borderline NMT__00064__sp_Q9SEH5_PMT3_TOBAC
Pnig06G0017360 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pnig07G0005510 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH