PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Pnig07G0006720 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Pnig07G0010360 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pnig07G0017350 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pnig07G0021120 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig07G0023460 Alkaloid NMT medium pass NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Pnig07G0027440 Alkaloid NMT low borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
Pnig08G0008330 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pnig08G0008350 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pnig08G0008360 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pnig08G0012990 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Pnig08G0014710 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
Pnig08G0017120 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pnig08G0017450 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
Pnig08G0018210 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig08G0026400 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Pnig08G0026410 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Pnig09G0007170 Alkaloid NMT low borderline NMT__00032__sp_Q5PP37_ATXR2_ARATH
Pnig09G0009770 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
Pnig09G0012640 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig09G0023180 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig09G0023240 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig10G0010440 Alkaloid NMT medium borderline NMT__00043__sp_Q8H0D2_DXMT1_COFAR
Pnig10G0010460 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig10G0010470 Alkaloid NMT medium borderline NMT__00043__sp_Q8H0D2_DXMT1_COFAR
Pnig10G0010500 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig11G0017240 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
Pnig12G0006790 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pnig12G0006800 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Pnig13G0004740 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
Pnig13G0006500 Alkaloid NMT low borderline NMT__00070__sp_W5U2K2_NMT_CATRO
Pnig13G0007170 Alkaloid NMT low borderline NMT__00070__sp_W5U2K2_NMT_CATRO
Pnig13G0007200 Alkaloid NMT low borderline NMT__00070__sp_W5U2K2_NMT_CATRO
Pnig13G0008290 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig13G0008300 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig13G0008310 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig13G0008320 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig13G0017360 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
Pnig13G0022890 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pnig13G0023160 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Pnig13G0023480 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Pnig13G0023700 Alkaloid NMT medium pass NMT__00023__sp_O82210_ANM12_ARATH
Pnig13G0024170 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
Pnig14G0004400 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pnig14G0004520 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pnig14G0010860 Alkaloid NMT medium pass NMT__00057__sp_Q9FR44_PEAM1_ARATH
Pnig14G0013050 Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC
Pnig14G0016200 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Pnig15G0000200 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pnig15G0000720 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
Pnig15G0007140 Alkaloid NMT low borderline NMT__00018__sp_I1M2U5_NAMT1_SOYBN