PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Pnig15G0007150 Alkaloid NMT medium borderline NMT__00062__sp_Q9SCP7_NAMT1_ARATH
Pnig15G0016630 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Pnig16G0012220 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
Pnig17G0012800 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
Pnig18G0007300 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Pnig18G0007420 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Pnig18G0011410 Alkaloid NMT medium borderline NMT__00038__sp_Q84PP7_MXMT2_COFAR
Pnig18G0011440 Alkaloid NMT medium borderline NMT__00052__sp_Q9AVJ9_MXMT1_COFAR
Pnig18G0011480 Alkaloid NMT medium borderline NMT__00038__sp_Q84PP7_MXMT2_COFAR
Pnig18G0011490 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig18G0011530 Alkaloid NMT medium borderline NMT__00052__sp_Q9AVJ9_MXMT1_COFAR
Pnig18G0011570 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig18G0013250 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig18G0013260 Alkaloid NMT medium borderline NMT__00038__sp_Q84PP7_MXMT2_COFAR
Pnig18G0013270 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig19G0004030 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
Pnig19G0005020 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
Pnig19G0005040 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
Pnig19G0010740 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Pnig19G0013540 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Pnig19G0014860 Alkaloid NMT medium pass NMT__00027__sp_Q10MI4_EZ1_ORYSJ
Pnig19G0018410 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig20G0000190 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Pnig20G0009970 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
Pnig20G0012320 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pnig20G0012360 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pnig20G0014790 Alkaloid NMT low borderline NMT__00010__sp_A4GE70_DXMT1_COFCA
Pnig20G0014830 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Pnig20G0018630 Alkaloid NMT low borderline NMT__00027__sp_Q10MI4_EZ1_ORYSJ
Pnig20G0018970 Alkaloid NMT low borderline NMT__00069__sp_Q9ZSM8_EZA1_ARATH
Pnig21G0000930 Alkaloid NMT low borderline NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
Pnig21G0000940 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig21G0001460 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig21G0001470 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig21G0001480 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig21G0001490 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig21G0001500 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig21G0001510 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig21G0001520 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Pnig21G0001530 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig21G0001540 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig21G0001550 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig21G0001560 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig21G0006150 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Pnig21G0007640 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig22G0003840 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
Pnig22G0006400 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Pnig22G0008510 Alkaloid NMT medium pass NMT__00050__sp_Q944H0_PEAM2_ARATH
Pnig22G0010420 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pnig22G0010790 Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC