PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Family-Level Assignments
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
Reset
Gene Pathway Family Confidence Status Best Target
Pnig01G0013850 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig01G0018740 Alkaloid T16H medium pass T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig01G0018770 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig01G0018860 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig01G0018990 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig01G0019160 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig01G0019180 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig01G0022670 Alkaloid T16H low borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig01G0022800 Alkaloid T16H low borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig02G0030510 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig03G0004360 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig03G0017040 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig03G0024070 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig03G0024110 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig04G0010760 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig04G0033420 Alkaloid T16H medium pass T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig07G0012360 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig08G0008320 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig08G0010020 Alkaloid T16H low borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig09G0022630 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig09G0022660 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig09G0022710 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig09G0022740 Alkaloid T16H medium pass T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig09G0022770 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig09G0022780 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig09G0022830 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig09G0022970 Alkaloid T16H low borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig09G0023000 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig09G0023030 Alkaloid T16H low borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig09G0023040 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig09G0023070 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig09G0023110 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig10G0016520 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig10G0016530 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig11G0013240 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig11G0013440 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig11G0013460 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig11G0014480 Alkaloid T16H low borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig13G0007720 Alkaloid T16H low borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig14G0010120 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig14G0010130 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig15G0010690 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig15G0011030 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig15G0021860 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig15G0025200 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig17G0007620 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig17G0007900 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig17G0007940 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig17G0008990 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig18G0000350 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO