PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
Pnig03G0031690 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
Pnig04G0004400 Terpenoid TPS medium pass TPS__00023__sp_A0A1V0QSG0_TS5FN_CANSA
Pnig04G0004410 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
Pnig04G0004420 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Pnig04G0004490 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Pnig04G0005020 Terpenoid TPS medium pass TPS__00126__sp_J7LH11_TPS8_PHYDL
Pnig04G0005030 Terpenoid TPS medium pass TPS__00052__sp_A0A7G5KLV2_TPS3_CANOD
Pnig04G0005040 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Pnig04G0005050 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Pnig04G0005610 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
Pnig04G0005620 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
Pnig04G0005630 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
Pnig04G0005640 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
Pnig04G0006920 Terpenoid TPS medium pass TPS__00084__sp_E2E2N5_BCPSD_ORIVU
Pnig04G0008020 Terpenoid TPS low borderline TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig04G0008370 Terpenoid TPS low borderline TPS__00112__sp_G0Y7D3_TPS3_LITCU
Pnig04G0008400 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Pnig04G0008420 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
Pnig04G0008440 Terpenoid TPS medium pass TPS__00025__sp_A0A1V0QSG6_TS4FN_CANSA
Pnig04G0008480 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Pnig04G0008520 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
Pnig04G0008560 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
Pnig04G0009160 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
Pnig04G0009170 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
Pnig04G0009190 Terpenoid TPS medium pass TPS__00116__sp_G5CV54_TPS14_SOLLC
Pnig05G0021670 Terpenoid TPS medium pass TPS__00017__sp_A0A1V0E4A6_TPS2_PIPNI
Pnig06G0001780 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Pnig06G0001920 Terpenoid TPS medium pass TPS__00126__sp_J7LH11_TPS8_PHYDL
Pnig06G0001930 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Pnig06G0002540 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Pnig06G0002560 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
Pnig07G0027540 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027550 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027560 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027580 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027600 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027610 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027630 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027650 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027660 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027670 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027680 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027690 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027700 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027710 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027730 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027740 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027750 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027780 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI
Pnig07G0027790 Terpenoid TPS medium pass TPS__00038__sp_A0A2R4QKX7_TPS3_PIPNI