PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status Best Target
Pnig04G0027250 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig04G0027260 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig04G0027290 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig04G0027310 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig04G0027320 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig04G0027330 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig05G0010930 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig05G0022620 Flavonoid UFGT medium pass UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig05G0027050 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig05G0033280 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig06G0012860 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig06G0012870 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig06G0012960 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig06G0012980 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig06G0019130 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig06G0019160 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig06G0019170 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig06G0019180 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig06G0019190 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig07G0005860 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig07G0010050 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig07G0010870 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig07G0011730 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig07G0012120 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig07G0031210 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig07G0031250 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig08G0014940 Flavonoid UFGT low borderline UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig08G0014950 Flavonoid UFGT low borderline UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig08G0015120 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig08G0015170 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig08G0015180 Flavonoid UFGT low borderline UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig08G0015370 Flavonoid UFGT low borderline UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig08G0016210 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig08G0016270 Flavonoid UFGT low borderline UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig08G0022680 Flavonoid UFGT medium pass UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig08G0025810 Flavonoid UFGT low borderline UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig08G0025880 Flavonoid UFGT low borderline UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig08G0025890 Flavonoid UFGT medium pass UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig09G0007300 Flavonoid UFGT low borderline UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig09G0021680 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig09G0021720 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig09G0021740 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig09G0021760 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig09G0021860 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig09G0021870 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig10G0011060 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig10G0012320 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig10G0012350 Flavonoid UFGT medium pass UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig10G0012360 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig10G0012380 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR