PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status Best Target
Pnig10G0016900 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig10G0016930 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig10G0016950 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig11G0007170 Flavonoid UFGT low borderline UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig11G0009220 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig11G0009230 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig11G0012680 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig11G0013730 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig11G0013740 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig11G0013780 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig11G0013790 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig11G0019950 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig12G0008620 Flavonoid UFGT low borderline UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig12G0010490 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig12G0010570 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig12G0010640 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig12G0011700 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig12G0011720 Flavonoid UFGT medium pass UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig12G0011770 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig12G0014010 Flavonoid UFGT low borderline UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig13G0005590 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig13G0005640 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig13G0005670 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig13G0005700 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig13G0006150 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig13G0006160 Flavonoid UFGT low borderline UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig13G0006170 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig13G0008530 Flavonoid UFGT low borderline UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig13G0008550 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig13G0008740 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig13G0021840 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig15G0001620 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig15G0006900 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig15G0014700 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig15G0016270 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig15G0016540 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig15G0019540 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig15G0019700 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig15G0019740 Flavonoid UFGT low borderline UFGT__00001__sp_P51094_UFOG_VITVI
Pnig15G0022350 Flavonoid UFGT medium pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Pnig16G0001080 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Pnig16G0005000 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig17G0000140 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig17G0000200 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig17G0000300 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig17G0000350 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR
Pnig17G0000500 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig17G0000540 Flavonoid UFGT low borderline UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Pnig17G0000570 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Pnig17G0000630 Flavonoid UFGT low borderline UFGT__00004__sp_Q96493_UFOG_GENTR