PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2984
Candidate Protein Records
2845
Pathway-Level Records
5474
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Pnig15G0002610 Alkaloid IO low borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig15G0003000 Alkaloid IO low borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig15G0003700 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig16G0004000 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig16G0005190 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig17G0001340 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig17G0001350 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig17G0001390 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig17G0001410 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig17G0005860 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig17G0005870 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig17G0007910 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig17G0008690 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig17G0008720 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig17G0009000 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig17G0014790 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig18G0000360 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig19G0003420 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig19G0015190 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig19G0015230 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig19G0015290 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig19G0015300 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig20G0018090 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig21G0013830 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig21G0013840 Alkaloid IO medium pass IO__00001__sp_W8JIS5_IO_CATRO
Pnig21G0014710 Alkaloid IO medium borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig21G0014720 Alkaloid IO low borderline IO__00001__sp_W8JIS5_IO_CATRO
Pnig02G0011580 Alkaloid ISY medium pass ISY__00004__sp_A0A221J5W8_ISY1_NEPCA
Pnig02G0012450 Alkaloid ISY medium pass ISY__00004__sp_A0A221J5W8_ISY1_NEPCA
Pnig06G0000800 Alkaloid ISY medium pass ISY__00002__sp_A0A1C9CX66_CYC2_CAMAC
Pnig06G0003010 Alkaloid ISY medium pass ISY__00002__sp_A0A1C9CX66_CYC2_CAMAC
Pnig18G0007520 Alkaloid ISY medium pass ISY__00002__sp_A0A1C9CX66_CYC2_CAMAC
Pnig23G0000810 Alkaloid ISY medium pass ISY__00004__sp_A0A221J5W8_ISY1_NEPCA
Pnig24G0015720 Alkaloid ISY medium pass ISY__00002__sp_A0A1C9CX66_CYC2_CAMAC
Pnig09G0020530 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Pnig11G0000460 Alkaloid LAMT low borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Pnig13G0001030 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Pnig14G0014430 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Pnig25G0005090 Alkaloid LAMT medium pass LAMT__00001__sp_B2KPR3_LAMT_CATRO
Pnig26G0002820 Alkaloid LAMT medium pass LAMT__00001__sp_B2KPR3_LAMT_CATRO
Pnig26G0002850 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Pnig01G0019150 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig02G0006200 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig02G0007110 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig06G0019650 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig08G0017940 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0004380 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0005230 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0005250 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC
Pnig13G0005270 Alkaloid MPO medium pass MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC