PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status Best Target
Pnig20G0014970 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA
Pnig20G0015010 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00005__sp_Q7XB10_4OMT2_PAPSO
Pnig24G0001660 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Pnig24G0001710 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Pnig24G0001780 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00005__sp_Q7XB10_4OMT2_PAPSO
Pnig24G0001790 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Pnig24G0001890 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Pnig24G0001930 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Pnig24G0001940 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00001__sp_D3KY98_OMT1_CARIP
Pnig24G0002200 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Pnig24G0002230 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Pnig24G0002260 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Pnig24G0002270 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA
Pnig24G0002420 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Pnig24G0002770 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00001__sp_D3KY98_OMT1_CARIP
Pnig24G0002920 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Pnig24G0004800 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA
Pnig25G0013160 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Pnig01G0005070 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0005120 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0005290 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0005330 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0010810 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0010840 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0010850 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0010870 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0010890 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0012790 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0012810 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0012820 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0012830 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0017240 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0017320 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0018320 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0020580 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0020600 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0023780 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0023790 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig02G0003830 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig02G0004060 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Pnig02G0004120 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Pnig02G0016330 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig02G0021930 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig02G0021980 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig02G0022000 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig02G0022010 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig02G0022020 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig02G0023860 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig03G0009480 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig03G0009490 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO