PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2984
Candidate Protein Records
2845
Pathway-Level Records
5474
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Pnig21G0007640 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Pnig22G0003840 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
Pnig22G0006400 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Pnig22G0008510 Alkaloid NMT medium pass NMT__00050__sp_Q944H0_PEAM2_ARATH
Pnig22G0010420 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Pnig22G0010790 Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC
Pnig22G0014640 Alkaloid NMT low borderline NMT__00041__sp_Q8GWT4_ANM15_ARATH
Pnig22G0015030 Alkaloid NMT low borderline NMT__00041__sp_Q8GWT4_ANM15_ARATH
Pnig23G0000960 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Pnig24G0005340 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Pnig24G0005440 Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC
Pnig24G0014930 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
Pnig26G0002830 Alkaloid NMT medium borderline NMT__00043__sp_Q8H0D2_DXMT1_COFAR
Pnig26G0011320 Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC
Pnig26G0012740 Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC
Pnig01G0031890 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0032720 Alkaloid ODC medium pass ODC__00002__sp_E0WN94_ODC_NICGL
Pnig01G0032740 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0032750 Alkaloid ODC low borderline ODC__00002__sp_E0WN94_ODC_NICGL
Pnig01G0032780 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0033660 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0033670 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0033700 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0033740 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0033750 Alkaloid ODC low borderline ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0033780 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0033830 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0034370 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0034380 Alkaloid ODC low borderline ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig01G0034410 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0034470 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0034510 Alkaloid ODC medium pass ODC__00001__sp_A0A1S4AUX8_ODC1A_TOBAC
Pnig13G0017030 Alkaloid ODC medium pass ODC__00002__sp_E0WN94_ODC_NICGL
Pnig13G0017740 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig13G0018830 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig13G0018840 Alkaloid ODC medium pass ODC__00003__sp_P93351_ODC1B_TOBAC
Pnig01G0015620 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig01G0015630 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig01G0015670 Alkaloid PMT low borderline PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig01G0025100 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig02G0007720 Alkaloid PMT low borderline PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig02G0008160 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig04G0016800 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig04G0017110 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig05G0022760 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig05G0022830 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig05G0022850 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig05G0029090 Alkaloid PMT low borderline PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig05G0032400 Alkaloid PMT low borderline PMT__00002__sp_Q5JNT2_AT4_ORYSJ
Pnig07G0004770 Alkaloid PMT medium pass PMT__00002__sp_Q5JNT2_AT4_ORYSJ