PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
Pnig05G0022820 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig05G0022830 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig05G0022850 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig05G0022880 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig05G0022890 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig05G0022930 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig05G0024840 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Pnig05G0025330 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Pnig05G0029090 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig05G0030710 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Pnig05G0032400 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig05G0032410 Terpenoid BAHD low borderline BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig05G0033060 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Pnig06G0000490 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Pnig06G0000510 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Pnig06G0000550 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Pnig06G0000630 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Pnig06G0003170 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Pnig06G0003180 Terpenoid BAHD low borderline BAHD__00027__sp_O80437_GPAT6_ARATH
Pnig06G0003250 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Pnig06G0003270 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Pnig06G0003290 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Pnig06G0003590 Terpenoid BAHD low borderline BAHD__00033__sp_P0DXG0_AT_STRYX
Pnig06G0004200 Terpenoid BAHD medium pass BAHD__00078__sp_Q9LHS7_GPAT7_ARATH
Pnig06G0004280 Terpenoid BAHD medium pass BAHD__00078__sp_Q9LHS7_GPAT7_ARATH
Pnig06G0004290 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Pnig06G0004360 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Pnig06G0004400 Terpenoid BAHD low borderline BAHD__00078__sp_Q9LHS7_GPAT7_ARATH
Pnig06G0011730 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Pnig06G0018570 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Pnig06G0018580 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Pnig06G0019730 Terpenoid BAHD medium pass BAHD__00014__sp_B9RK42_GPC1_RICCO
Pnig07G0004770 Terpenoid BAHD medium pass BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
Pnig07G0004810 Terpenoid BAHD low borderline BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
Pnig07G0007090 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Pnig07G0008140 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Pnig07G0009190 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Pnig07G0009430 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Pnig07G0013930 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Pnig07G0014320 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Pnig07G0017710 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Pnig07G0017720 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Pnig07G0019470 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Pnig07G0020220 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Pnig07G0023520 Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
Pnig07G0023530 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig07G0023540 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig07G0023550 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig07G0028860 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pnig07G0029260 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA