PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2984
Candidate Protein Records
2845
Pathway-Level Records
5474
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Pnig10G0016520 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig10G0016530 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig11G0013240 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig11G0013440 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig11G0013460 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig11G0014480 Alkaloid T16H low borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig13G0007720 Alkaloid T16H low borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig14G0010120 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig14G0010130 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig15G0010690 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig15G0011030 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig15G0021860 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig15G0025200 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig17G0007620 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig17G0007900 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig17G0007940 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig17G0008990 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig18G0000350 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig18G0015320 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig18G0019570 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig22G0007560 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig23G0005580 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig23G0010430 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig23G0011710 Alkaloid T16H low borderline T16H__00001__sp_P98183_C71DC_CATRO
Pnig24G0010820 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig24G0010830 Alkaloid T16H low borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
Pnig01G0013820 Alkaloid T3O medium borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig01G0018970 Alkaloid T3O medium borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig01G0032850 Alkaloid T3O medium borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig03G0009710 Alkaloid T3O low borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig03G0012390 Alkaloid T3O medium borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig10G0016540 Alkaloid T3O low borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig13G0022870 Alkaloid T3O medium pass T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig13G0023140 Alkaloid T3O medium pass T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig14G0018190 Alkaloid T3O medium pass T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig15G0011670 Alkaloid T3O medium borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig15G0021850 Alkaloid T3O low borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig17G0007610 Alkaloid T3O medium pass T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig17G0008710 Alkaloid T3O medium pass T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig20G0005320 Alkaloid T3O medium borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig20G0005340 Alkaloid T3O medium borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig20G0007870 Alkaloid T3O medium borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig24G0003420 Alkaloid T3O medium borderline T3O__00001__sp_I1TEM1_T3O_CATRO
Pnig03G0009200 Alkaloid TDC medium borderline TDC__00006__sp_Q7XHL3_TDC2_ORYSJ
Pnig03G0031440 Alkaloid TDC medium borderline TDC__00003__sp_P93083_TDC2_CAMAC
Pnig05G0002120 Alkaloid TDC low borderline TDC__00002__sp_P93082_TDC1_CAMAC
Pnig15G0000340 Alkaloid TDC medium borderline TDC__00003__sp_P93083_TDC2_CAMAC
Pnig15G0017050 Alkaloid TDC low borderline TDC__00006__sp_Q7XHL3_TDC2_ORYSJ
Pnig02G0010130 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Pnig02G0010730 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB