PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2984
Candidate Protein Records
2845
Pathway-Level Records
5474
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
Pnig03G0010030 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Pnig04G0021440 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Pnig08G0021770 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Pnig15G0015690 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Pnig15G0016040 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Pnig15G0016050 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Pnig15G0016060 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Pnig17G0010290 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Pnig09G0006280 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
Pnig11G0006840 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00002__sp_A0A0S2PM92_TCS1F_CAMCR
Pnig18G0011450 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00009__sp_Q9AVK0_XMT1_COFAR
Pnig18G0011540 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00009__sp_Q9AVK0_XMT1_COFAR
Pnig18G0011580 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00009__sp_Q9AVK0_XMT1_COFAR
Pnig18G0013240 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00001__sp_A0A0S2PM82_TCS3_CAMSI
Pnig20G0014780 Alkaloid XMT_MXMT_DXMT medium pass XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
Pnig01G0000320 Flavonoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Pnig01G0004790 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pnig01G0007060 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pnig01G0008350 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pnig01G0020200 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pnig01G0026110 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pnig01G0026170 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pnig01G0031840 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pnig01G0032600 Flavonoid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pnig01G0034860 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pnig01G0035440 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pnig01G0035590 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pnig01G0035920 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pnig01G0036090 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pnig01G0037130 Flavonoid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY
Pnig01G0039360 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pnig03G0000160 Flavonoid 4CL medium pass 4CL__00009__sp_Q67W82_4CL4_ORYSJ
Pnig03G0015850 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pnig03G0016060 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pnig03G0016360 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pnig03G0024150 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pnig03G0024530 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pnig03G0024540 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pnig04G0010850 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Pnig04G0029560 Flavonoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Pnig05G0010240 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pnig05G0010250 Flavonoid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pnig05G0016890 Flavonoid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
Pnig06G0015080 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pnig06G0015090 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pnig06G0017310 Flavonoid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
Pnig07G0005470 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pnig07G0009670 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pnig07G0009700 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pnig07G0016960 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH