PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status Best Target
Pnig01G0020120 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Pnig01G0020130 Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Pnig01G0039090 Flavonoid CHS low borderline CHS__00009__sp_Q9AU11_PKS1_RUBID
Pnig01G0039200 Flavonoid CHS low borderline CHS__00009__sp_Q9AU11_PKS1_RUBID
Pnig03G0000720 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pnig03G0000730 Flavonoid CHS medium pass CHS__00002__sp_B0LDU5_PKS4_RUBID
Pnig03G0000750 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Pnig03G0000760 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pnig03G0000770 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pnig03G0000780 Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Pnig03G0000820 Flavonoid CHS medium pass CHS__00009__sp_Q9AU11_PKS1_RUBID
Pnig03G0001470 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pnig07G0030310 Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Pnig12G0001800 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Pnig15G0025230 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pnig15G0025250 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pnig15G0025700 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pnig15G0025710 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pnig16G0020170 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Pnig17G0005250 Flavonoid CHS medium pass CHS__00006__sp_P30074_CHS2_MEDSA
Pnig21G0013320 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Pnig01G0009160 Flavonoid DFR low borderline DFR__00002__sp_Q84KP0_DFRA_PYRCO
Pnig01G0036900 Flavonoid DFR medium pass DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig02G0003520 Flavonoid DFR low borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig04G0005160 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig04G0008670 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig05G0017840 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig07G0018620 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig09G0011710 Flavonoid DFR medium pass DFR__00003__sp_Q9XES5_DFRA_MALDO
Pnig09G0013110 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig10G0004080 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig10G0004090 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig10G0010480 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig11G0000800 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig11G0000810 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig11G0000830 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig11G0000850 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig11G0006870 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig11G0008380 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig11G0021820 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig11G0021830 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig13G0021030 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig14G0000270 Flavonoid DFR medium pass DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig14G0001700 Flavonoid DFR medium pass DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig17G0009050 Flavonoid DFR medium pass DFR__00001__sp_Q500U8_TKPR1_ARATH
Pnig21G0008830 Flavonoid DFR medium pass DFR__00002__sp_Q84KP0_DFRA_PYRCO
Pnig21G0009030 Flavonoid DFR medium pass DFR__00002__sp_Q84KP0_DFRA_PYRCO
Pnig25G0006160 Flavonoid DFR medium borderline DFR__00003__sp_Q9XES5_DFRA_MALDO
Pnig25G0006310 Flavonoid DFR medium borderline DFR__00003__sp_Q9XES5_DFRA_MALDO
Pnig26G0006450 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH