PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status Best Target
Pnig05G0013230 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig05G0029360 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00001__sp_I1IUJ6_C90A1_BRADI
Pnig05G0029510 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00001__sp_I1IUJ6_C90A1_BRADI
Pnig05G0029610 Steroid CPD/CYP90A1 medium pass CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig05G0032670 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00001__sp_I1IUJ6_C90A1_BRADI
Pnig06G0000760 Steroid CPD/CYP90A1 medium borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig06G0003060 Steroid CPD/CYP90A1 medium borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig07G0008430 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00001__sp_I1IUJ6_C90A1_BRADI
Pnig08G0005750 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00001__sp_I1IUJ6_C90A1_BRADI
Pnig08G0006580 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig08G0006600 Steroid CPD/CYP90A1 medium borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig08G0006610 Steroid CPD/CYP90A1 medium pass CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig08G0006710 Steroid CPD/CYP90A1 medium pass CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig08G0006740 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig13G0004040 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00001__sp_I1IUJ6_C90A1_BRADI
Pnig14G0011510 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig15G0001210 Steroid CPD/CYP90A1 medium borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig15G0004370 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig20G0004740 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig20G0006330 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig21G0004990 Steroid CPD/CYP90A1 medium borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig21G0006840 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig21G0006850 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig21G0011490 Steroid CPD/CYP90A1 low borderline CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig22G0009260 Steroid CPD/CYP90A1 medium pass CPD_CYP90A1__00002__sp_Q42569_C90A1_ARATH
Pnig23G0014480 Steroid CPD/CYP90A1 medium borderline CPD_CYP90A1__00001__sp_I1IUJ6_C90A1_BRADI
Pnig24G0015810 Steroid CPD/CYP90A1 medium borderline CPD_CYP90A1__00001__sp_I1IUJ6_C90A1_BRADI
Pnig06G0015980 Steroid CPI1 low borderline CPI1__00001__sp_Q9M643_CCI1_ARATH
Pnig24G0007100 Steroid CPI1 medium pass CPI1__00001__sp_Q9M643_CCI1_ARATH
Pnig01G0018760 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig01G0018920 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig02G0030510 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig03G0012390 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig04G0010760 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig04G0024350 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig08G0017250 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig14G0010130 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig15G0011650 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig15G0011670 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig19G0007610 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig20G0005320 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig20G0005340 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig20G0007870 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig24G0003420 Steroid CYP51G1 low borderline CYP51G1__00001__sp_Q9SAA9_CP511_ARATH
Pnig04G0002940 Steroid CYP90D1 medium borderline CYP90D1__00001__sp_Q94IA6_C90D1_ARATH
Pnig05G0015790 Steroid CYP90D1 medium borderline CYP90D1__00001__sp_Q94IA6_C90D1_ARATH
Pnig05G0023420 Steroid CYP90D1 medium borderline CYP90D1__00001__sp_Q94IA6_C90D1_ARATH
Pnig07G0024460 Steroid CYP90D1 medium borderline CYP90D1__00001__sp_Q94IA6_C90D1_ARATH
Pnig11G0000450 Steroid CYP90D1 low borderline CYP90D1__00001__sp_Q94IA6_C90D1_ARATH
Pnig11G0021510 Steroid CYP90D1 low borderline CYP90D1__00001__sp_Q94IA6_C90D1_ARATH