PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Gene Pathway Family Confidence Status Best Target
Pnig13G0010770 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Pnig13G0015240 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Pnig13G0018140 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Pnig13G0018150 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Pnig13G0018530 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Pnig13G0024160 Terpenoid BAHD medium pass BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
Pnig14G0000740 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Pnig14G0005030 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Pnig14G0005070 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pnig14G0005080 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pnig14G0005100 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pnig14G0005120 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pnig14G0005130 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pnig14G0005150 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pnig14G0005170 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Pnig14G0010590 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE
Pnig14G0011030 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE
Pnig14G0011060 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE
Pnig14G0016240 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Pnig15G0003310 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Pnig15G0003430 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Pnig15G0006970 Terpenoid BAHD low borderline BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Pnig15G0008130 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Pnig15G0008340 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Pnig15G0015480 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Pnig15G0015490 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Pnig15G0015500 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Pnig15G0015520 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Pnig15G0016140 Terpenoid BAHD medium borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
Pnig15G0016190 Terpenoid BAHD low borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
Pnig15G0016390 Terpenoid BAHD medium pass BAHD__00044__sp_Q56WD9_THIK2_ARATH
Pnig15G0023610 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Pnig16G0004720 Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
Pnig16G0004730 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig16G0004760 Terpenoid BAHD medium pass BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Pnig16G0005990 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Pnig16G0010060 Terpenoid BAHD medium pass BAHD__00033__sp_P0DXG0_AT_STRYX
Pnig16G0010070 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
Pnig16G0010080 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
Pnig16G0010120 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Pnig16G0013750 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Pnig16G0015030 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
Pnig17G0001790 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Pnig17G0010950 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
Pnig17G0011050 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
Pnig17G0011430 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Pnig17G0014440 Terpenoid BAHD medium pass BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Pnig17G0014480 Terpenoid BAHD medium pass BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Pnig17G0014510 Terpenoid BAHD medium pass BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Pnig17G0017910 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH