PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2984
Candidate Protein Records
2845
Pathway-Level Records
5474
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
Pnig05G0024700 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
Pnig05G0025130 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
Pnig07G0026060 Terpenoid FPPS low borderline FPPS__00001__sp_B8XA40_ZFPS_SOLHA
Pnig08G0030450 Terpenoid FPPS medium borderline FPPS__00005__sp_P34802_GGPP1_ARATH
Pnig08G0030620 Terpenoid FPPS medium borderline FPPS__00005__sp_P34802_GGPP1_ARATH
Pnig09G0024340 Terpenoid FPPS low borderline FPPS__00001__sp_B8XA40_ZFPS_SOLHA
Pnig13G0001890 Terpenoid FPPS medium borderline FPPS__00005__sp_P34802_GGPP1_ARATH
Pnig13G0019470 Terpenoid FPPS medium pass FPPS__00007__sp_P80042_GGPPS_CAPAN
Pnig19G0014910 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
Pnig20G0018340 Terpenoid FPPS medium pass FPPS__00006__sp_P49350_FPPS_ARTAN
Pnig21G0011490 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
Pnig06G0014650 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
Pnig24G0008400 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
Pnig01G0023430 Terpenoid GPPS medium borderline GPPS__00001__sp_Q5HZ00_SPS3_ARATH
Pnig01G0000620 Terpenoid HDR/IspH medium pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
Pnig01G0001530 Terpenoid HDR/IspH medium pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
Pnig12G0005920 Terpenoid HDR/IspH medium pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
Pnig18G0015350 Terpenoid HDS/IspG medium pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
Pnig23G0010390 Terpenoid HDS/IspG medium pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
Pnig23G0011670 Terpenoid HDS/IspG medium pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
Pnig01G0016010 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig01G0022410 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig02G0015130 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig03G0013300 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig04G0026080 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig05G0027130 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig05G0030840 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig05G0031160 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig05G0034460 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig06G0009460 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig06G0011600 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig06G0013280 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig06G0015540 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig06G0015550 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig06G0015920 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig08G0008310 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig08G0009160 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig09G0013120 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig09G0013130 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig10G0005260 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig10G0013480 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig11G0015630 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig11G0015640 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig13G0014790 Terpenoid HMGR low borderline HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig13G0014800 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig14G0007830 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig14G0008820 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Pnig14G0009450 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig15G0011810 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Pnig15G0015040 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI