PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
Potra003351g21423.6 Flavonoid 4CL low borderline
Potra003351g21423.7 Flavonoid 4CL low borderline
Potra003626g22207.1 Flavonoid 4CL medium pass
Potra003626g22207.2 Flavonoid 4CL medium pass
Potra003626g22207.3 Flavonoid 4CL medium pass
Potra003648g22290.1 Flavonoid 4CL low borderline
Potra003648g22290.2 Flavonoid 4CL low borderline
Potra003648g22290.3 Flavonoid 4CL low borderline
Potra003648g22290.4 Flavonoid 4CL low borderline
Potra003648g22290.5 Flavonoid 4CL low borderline
Potra003823g22994.4 Flavonoid 4CL low borderline
Potra003823g22994.5 Flavonoid 4CL low borderline
Potra003823g22994.6 Flavonoid 4CL low borderline
Potra004099g34518.1 Flavonoid 4CL medium pass
Potra004222g24700.1 Flavonoid 4CL medium pass
Potra004222g24700.2 Flavonoid 4CL medium pass
Potra004222g24700.3 Flavonoid 4CL medium pass
Potra004222g24700.4 Flavonoid 4CL medium pass
Potra007461g25972.1 Flavonoid 4CL medium pass
Potra007461g25972.2 Flavonoid 4CL medium pass
Potra007461g25972.3 Flavonoid 4CL medium pass
Potra169071g27405.1 Flavonoid 4CL medium pass
Potra169071g27405.2 Flavonoid 4CL medium pass
Potra169071g27405.3 Flavonoid 4CL medium pass
Potra169580g34519.1 Flavonoid 4CL medium pass
Potra177143g27937.1 Flavonoid 4CL medium pass
Potra177143g27937.2 Flavonoid 4CL medium pass
Potra177143g27937.3 Flavonoid 4CL medium pass
Potra179682g28040.1 Flavonoid 4CL medium pass
Potra179682g28040.2 Flavonoid 4CL medium pass
Potra179682g28040.3 Flavonoid 4CL medium pass
Potra194176g28935.1 Flavonoid 4CL medium pass
Potra000186g00748.1 Phenylpropanoid 4CL medium pass
Potra000186g00748.2 Phenylpropanoid 4CL medium pass
Potra000186g00748.3 Phenylpropanoid 4CL medium pass
Potra000186g00748.4 Phenylpropanoid 4CL medium pass
Potra000186g00748.5 Phenylpropanoid 4CL medium pass
Potra000322g01132.1 Phenylpropanoid 4CL medium pass
Potra000526g03628.1 Phenylpropanoid 4CL medium pass
Potra000558g04048.1 Phenylpropanoid 4CL low borderline
Potra000558g04048.2 Phenylpropanoid 4CL low borderline
Potra000558g04048.3 Phenylpropanoid 4CL low borderline
Potra000558g04048.4 Phenylpropanoid 4CL low borderline
Potra000558g04048.5 Phenylpropanoid 4CL low borderline
Potra000595g04517.1 Phenylpropanoid 4CL medium pass
Potra000595g04517.2 Phenylpropanoid 4CL medium pass
Potra000595g04517.3 Phenylpropanoid 4CL medium pass
Potra000646g04946.1 Phenylpropanoid 4CL medium pass
Potra000646g04946.2 Phenylpropanoid 4CL medium pass
Potra000646g04946.3 Phenylpropanoid 4CL medium pass