PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
Potra002369g18050.7 Phenylpropanoid 4CL low borderline
Potra002369g18050.8 Phenylpropanoid 4CL low borderline
Potra002369g18050.9 Phenylpropanoid 4CL low borderline
Potra002371g18066.1 Phenylpropanoid 4CL medium pass
Potra002393g18199.1 Phenylpropanoid 4CL medium pass
Potra002393g18199.2 Phenylpropanoid 4CL medium pass
Potra002393g18199.3 Phenylpropanoid 4CL medium pass
Potra002478g18751.1 Phenylpropanoid 4CL low borderline
Potra002478g18751.2 Phenylpropanoid 4CL low borderline
Potra002478g18751.3 Phenylpropanoid 4CL low borderline
Potra002478g18751.4 Phenylpropanoid 4CL low borderline
Potra002478g18751.5 Phenylpropanoid 4CL low borderline
Potra002478g18751.6 Phenylpropanoid 4CL low borderline
Potra002819g20049.1 Phenylpropanoid 4CL medium pass
Potra002831g20080.1 Phenylpropanoid 4CL medium pass
Potra003044g20611.1 Phenylpropanoid 4CL low borderline
Potra003044g20611.2 Phenylpropanoid 4CL low borderline
Potra003044g20611.3 Phenylpropanoid 4CL low borderline
Potra003044g20611.4 Phenylpropanoid 4CL low borderline
Potra003236g21091.1 Phenylpropanoid 4CL medium pass
Potra003236g21091.2 Phenylpropanoid 4CL medium pass
Potra003236g21091.3 Phenylpropanoid 4CL medium pass
Potra003236g21091.4 Phenylpropanoid 4CL medium pass
Potra003236g21091.5 Phenylpropanoid 4CL medium pass
Potra003236g21091.6 Phenylpropanoid 4CL low borderline
Potra003236g21091.7 Phenylpropanoid 4CL low borderline
Potra003265g21169.1 Phenylpropanoid 4CL medium pass
Potra003351g21423.1 Phenylpropanoid 4CL low borderline
Potra003351g21423.2 Phenylpropanoid 4CL low borderline
Potra003351g21423.3 Phenylpropanoid 4CL low borderline
Potra003351g21423.4 Phenylpropanoid 4CL low borderline
Potra003351g21423.5 Phenylpropanoid 4CL low borderline
Potra003351g21423.6 Phenylpropanoid 4CL low borderline
Potra003351g21423.7 Phenylpropanoid 4CL low borderline
Potra003626g22207.1 Phenylpropanoid 4CL medium pass
Potra003626g22207.2 Phenylpropanoid 4CL medium pass
Potra003626g22207.3 Phenylpropanoid 4CL medium pass
Potra003648g22290.1 Phenylpropanoid 4CL low borderline
Potra003648g22290.2 Phenylpropanoid 4CL low borderline
Potra003648g22290.3 Phenylpropanoid 4CL low borderline
Potra003648g22290.4 Phenylpropanoid 4CL low borderline
Potra003648g22290.5 Phenylpropanoid 4CL low borderline
Potra003823g22994.4 Phenylpropanoid 4CL low borderline
Potra003823g22994.5 Phenylpropanoid 4CL low borderline
Potra003823g22994.6 Phenylpropanoid 4CL low borderline
Potra004099g34518.1 Phenylpropanoid 4CL medium pass
Potra004222g24700.1 Phenylpropanoid 4CL medium pass
Potra004222g24700.2 Phenylpropanoid 4CL medium pass
Potra004222g24700.3 Phenylpropanoid 4CL medium pass
Potra004222g24700.4 Phenylpropanoid 4CL medium pass