PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Potra000686g05324.1 Rosmarinic Acid C4H low borderline
Potra000701g05464.1 Rosmarinic Acid C4H low borderline
Potra000701g05464.3 Rosmarinic Acid C4H low borderline
Potra000701g05464.5 Rosmarinic Acid C4H low borderline
Potra000701g05465.1 Rosmarinic Acid C4H low borderline
Potra000701g05466.1 Rosmarinic Acid C4H medium pass
Potra000701g05467.1 Rosmarinic Acid C4H medium pass
Potra000701g05467.2 Rosmarinic Acid C4H medium pass
Potra000716g05618.1 Rosmarinic Acid C4H medium pass
Potra000726g05681.1 Rosmarinic Acid C4H low borderline
Potra000726g05683.1 Rosmarinic Acid C4H low borderline
Potra000726g05683.2 Rosmarinic Acid C4H low borderline
Potra000726g35476.1 Rosmarinic Acid C4H low borderline
Potra000729g05721.1 Rosmarinic Acid C4H medium pass
Potra000729g05722.1 Rosmarinic Acid C4H medium pass
Potra000729g05723.1 Rosmarinic Acid C4H low borderline
Potra000729g05723.2 Rosmarinic Acid C4H low borderline
Potra000751g05908.1 Rosmarinic Acid C4H low borderline
Potra000754g05943.1 Rosmarinic Acid C4H medium pass
Potra000754g05943.2 Rosmarinic Acid C4H medium pass
Potra000820g06544.1 Rosmarinic Acid C4H medium pass
Potra000820g06544.2 Rosmarinic Acid C4H medium pass
Potra000820g06544.3 Rosmarinic Acid C4H medium pass
Potra000828g06627.1 Rosmarinic Acid C4H low borderline
Potra000854g06913.1 Rosmarinic Acid C4H low borderline
Potra000863g06975.1 Rosmarinic Acid C4H low borderline
Potra000863g06975.2 Rosmarinic Acid C4H low borderline
Potra000874g07032.1 Rosmarinic Acid C4H low borderline
Potra000875g07041.1 Rosmarinic Acid C4H low borderline
Potra000912g07386.1 Rosmarinic Acid C4H low borderline
Potra000971g08018.1 Rosmarinic Acid C4H low borderline
Potra000973g08035.1 Rosmarinic Acid C4H low borderline
Potra000973g08035.2 Rosmarinic Acid C4H low borderline
Potra001008g08390.1 Rosmarinic Acid C4H low borderline
Potra001008g08390.2 Rosmarinic Acid C4H low borderline
Potra001008g08390.3 Rosmarinic Acid C4H low borderline
Potra001027g08594.1 Rosmarinic Acid C4H low borderline
Potra001037g08746.1 Rosmarinic Acid C4H low borderline
Potra001039g08777.1 Rosmarinic Acid C4H low borderline
Potra001048g08911.1 Rosmarinic Acid C4H low borderline
Potra001055g09032.1 Rosmarinic Acid C4H low borderline
Potra001056g09046.1 Rosmarinic Acid C4H low borderline
Potra001079g09332.1 Rosmarinic Acid C4H low borderline
Potra001089g30528.1 Rosmarinic Acid C4H low borderline
Potra001102g09616.1 Rosmarinic Acid C4H low borderline
Potra001148g10006.1 Rosmarinic Acid C4H medium pass
Potra001165g10110.1 Rosmarinic Acid C4H low borderline
Potra001165g10110.2 Rosmarinic Acid C4H low borderline
Potra001174g10171.1 Rosmarinic Acid C4H low borderline
Potra001174g10171.2 Rosmarinic Acid C4H low borderline