PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Potra001965g15513.1 Rosmarinic Acid C4H low borderline
Potra002021g15846.1 Rosmarinic Acid C4H low borderline
Potra002099g16332.1 Rosmarinic Acid C4H low borderline
Potra002099g16332.2 Rosmarinic Acid C4H low borderline
Potra002122g16460.1 Rosmarinic Acid C4H medium pass
Potra002139g16572.1 Rosmarinic Acid C4H low borderline
Potra002140g16581.1 Rosmarinic Acid C4H low borderline
Potra002169g16741.1 Rosmarinic Acid C4H low borderline
Potra002169g16741.2 Rosmarinic Acid C4H low borderline
Potra002169g16741.3 Rosmarinic Acid C4H low borderline
Potra002169g16741.4 Rosmarinic Acid C4H low borderline
Potra002169g16741.5 Rosmarinic Acid C4H low borderline
Potra002169g16741.7 Rosmarinic Acid C4H low borderline
Potra002203g16962.1 Rosmarinic Acid C4H low borderline
Potra002265g17375.1 Rosmarinic Acid C4H low borderline
Potra002311g17626.1 Rosmarinic Acid C4H medium pass
Potra002311g17626.2 Rosmarinic Acid C4H low borderline
Potra002322g17764.1 Rosmarinic Acid C4H low borderline
Potra002334g17841.1 Rosmarinic Acid C4H low borderline
Potra002377g18113.1 Rosmarinic Acid C4H low borderline
Potra002448g18542.1 Rosmarinic Acid C4H low borderline
Potra002448g18543.1 Rosmarinic Acid C4H low borderline
Potra002480g18757.1 Rosmarinic Acid C4H low borderline
Potra002497g18861.1 Rosmarinic Acid C4H low borderline
Potra002497g18861.2 Rosmarinic Acid C4H low borderline
Potra002497g18861.4 Rosmarinic Acid C4H low borderline
Potra002516g18979.1 Rosmarinic Acid C4H low borderline
Potra002537g19112.1 Rosmarinic Acid C4H low borderline
Potra002598g19517.1 Rosmarinic Acid C4H low borderline
Potra002632g19618.1 Rosmarinic Acid C4H low borderline
Potra002640g19633.1 Rosmarinic Acid C4H low borderline
Potra002642g19640.1 Rosmarinic Acid C4H low borderline
Potra002642g19640.2 Rosmarinic Acid C4H medium pass
Potra002696g19781.1 Rosmarinic Acid C4H low borderline
Potra002696g19782.1 Rosmarinic Acid C4H low borderline
Potra002699g19788.1 Rosmarinic Acid C4H low borderline
Potra002699g19788.2 Rosmarinic Acid C4H low borderline
Potra002699g19788.3 Rosmarinic Acid C4H low borderline
Potra002913g20293.1 Rosmarinic Acid C4H low borderline
Potra002923g20324.1 Rosmarinic Acid C4H low borderline
Potra002923g20324.2 Rosmarinic Acid C4H low borderline
Potra002934g20340.1 Rosmarinic Acid C4H low borderline
Potra003058g20641.1 Rosmarinic Acid C4H low borderline
Potra003058g20643.1 Rosmarinic Acid C4H medium pass
Potra003058g20643.2 Rosmarinic Acid C4H medium pass
Potra003083g20700.1 Rosmarinic Acid C4H low borderline
Potra003101g20744.1 Rosmarinic Acid C4H low borderline
Potra003101g20744.2 Rosmarinic Acid C4H low borderline
Potra003101g20744.3 Rosmarinic Acid C4H low borderline
Potra003114g20768.1 Rosmarinic Acid C4H medium pass