PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Potra003114g20770.1 Rosmarinic Acid C4H medium pass
Potra003179g20912.1 Rosmarinic Acid C4H low borderline
Potra003191g20955.1 Rosmarinic Acid C4H low borderline
Potra003191g33678.1 Rosmarinic Acid C4H low borderline
Potra003205g20996.1 Rosmarinic Acid C4H low borderline
Potra003231g21077.1 Rosmarinic Acid C4H low borderline
Potra003231g21077.2 Rosmarinic Acid C4H low borderline
Potra003231g21077.3 Rosmarinic Acid C4H low borderline
Potra003299g21279.1 Rosmarinic Acid C4H low borderline
Potra003450g21701.1 Rosmarinic Acid C4H low borderline
Potra003450g21702.1 Rosmarinic Acid C4H medium pass
Potra003450g21702.2 Rosmarinic Acid C4H medium pass
Potra003474g21781.1 Rosmarinic Acid C4H low borderline
Potra003518g21879.1 Rosmarinic Acid C4H low borderline
Potra003537g21942.1 Rosmarinic Acid C4H low borderline
Potra003537g21942.2 Rosmarinic Acid C4H low borderline
Potra003537g21942.3 Rosmarinic Acid C4H low borderline
Potra003537g21942.4 Rosmarinic Acid C4H low borderline
Potra003542g21960.1 Rosmarinic Acid C4H low borderline
Potra003652g22310.1 Rosmarinic Acid C4H low borderline
Potra003659g22346.1 Rosmarinic Acid C4H medium pass
Potra003659g22346.2 Rosmarinic Acid C4H medium pass
Potra003864g23219.1 Rosmarinic Acid C4H low borderline
Potra003987g24014.1 Rosmarinic Acid C4H medium pass
Potra004022g24309.1 Rosmarinic Acid C4H low borderline
Potra004022g24309.2 Rosmarinic Acid C4H low borderline
Potra004030g24345.1 Rosmarinic Acid C4H low borderline
Potra004056g24397.5 Rosmarinic Acid C4H low borderline
Potra004073g24445.1 Rosmarinic Acid C4H low borderline
Potra004073g24445.2 Rosmarinic Acid C4H low borderline
Potra004252g24734.1 Rosmarinic Acid C4H medium pass
Potra004401g24886.2 Rosmarinic Acid C4H low borderline
Potra004401g24886.3 Rosmarinic Acid C4H low borderline
Potra004401g24886.5 Rosmarinic Acid C4H low borderline
Potra004432g24917.1 Rosmarinic Acid C4H medium pass
Potra004432g24917.2 Rosmarinic Acid C4H medium pass
Potra004998g25245.1 Rosmarinic Acid C4H low borderline
Potra004998g25245.2 Rosmarinic Acid C4H low borderline
Potra005080g25268.1 Rosmarinic Acid C4H low borderline
Potra005271g25339.1 Rosmarinic Acid C4H low borderline
Potra005304g32952.1 Rosmarinic Acid C4H low borderline
Potra005630g25450.1 Rosmarinic Acid C4H low borderline
Potra005767g25483.1 Rosmarinic Acid C4H low borderline
Potra005938g33038.1 Rosmarinic Acid C4H low borderline
Potra006169g25588.1 Rosmarinic Acid C4H low borderline
Potra006311g25650.1 Rosmarinic Acid C4H low borderline
Potra006311g25650.2 Rosmarinic Acid C4H low borderline
Potra006786g25798.1 Rosmarinic Acid C4H low borderline
Potra007587g25997.1 Rosmarinic Acid C4H low borderline
Potra007987g26074.1 Rosmarinic Acid C4H low borderline