PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
Potra000180g00706.1 Steroid CYP90D1 medium borderline
Potra000180g00706.2 Steroid CYP90D1 medium borderline
Potra000194g00837.1 Steroid CYP90D1 medium borderline
Potra000341g01173.3 Steroid CYP90D1 medium borderline
Potra000432g02300.1 Steroid CYP90D1 low borderline
Potra000503g03270.1 Steroid CYP90D1 low borderline
Potra000508g03331.1 Steroid CYP90D1 low borderline
Potra000601g04563.1 Steroid CYP90D1 medium borderline
Potra000601g04563.2 Steroid CYP90D1 medium borderline
Potra000655g05045.1 Steroid CYP90D1 low borderline
Potra000662g34588.1 Steroid CYP90D1 low borderline
Potra000701g05464.1 Steroid CYP90D1 medium borderline
Potra000701g05465.1 Steroid CYP90D1 medium borderline
Potra000701g05465.2 Steroid CYP90D1 medium borderline
Potra000701g05467.1 Steroid CYP90D1 low borderline
Potra000701g05467.2 Steroid CYP90D1 low borderline
Potra000716g05618.1 Steroid CYP90D1 low borderline
Potra000828g06627.1 Steroid CYP90D1 medium borderline
Potra000868g06995.1 Steroid CYP90D1 medium borderline
Potra000868g06995.2 Steroid CYP90D1 medium borderline
Potra001008g08390.1 Steroid CYP90D1 medium borderline
Potra001008g08390.2 Steroid CYP90D1 medium borderline
Potra001008g08390.3 Steroid CYP90D1 medium borderline
Potra001037g08746.1 Steroid CYP90D1 low borderline
Potra001056g09046.1 Steroid CYP90D1 low borderline
Potra001102g09616.1 Steroid CYP90D1 low borderline
Potra001585g13101.1 Steroid CYP90D1 medium borderline
Potra001613g13292.1 Steroid CYP90D1 medium borderline
Potra001613g13292.2 Steroid CYP90D1 medium borderline
Potra001645g13492.1 Steroid CYP90D1 medium borderline
Potra001645g13492.2 Steroid CYP90D1 medium borderline
Potra001645g13492.3 Steroid CYP90D1 medium pass
Potra001730g14086.1 Steroid CYP90D1 medium borderline
Potra001876g14979.1 Steroid CYP90D1 medium borderline
Potra001876g14979.2 Steroid CYP90D1 medium borderline
Potra002129g16502.2 Steroid CYP90D1 medium borderline
Potra002139g16572.1 Steroid CYP90D1 low borderline
Potra002169g16741.5 Steroid CYP90D1 low borderline
Potra002411g18340.1 Steroid CYP90D1 medium borderline
Potra002411g18340.2 Steroid CYP90D1 medium borderline
Potra002448g18542.1 Steroid CYP90D1 low borderline
Potra002913g20293.1 Steroid CYP90D1 low borderline
Potra003083g20700.1 Steroid CYP90D1 low borderline
Potra003191g20955.1 Steroid CYP90D1 medium borderline
Potra003191g33678.1 Steroid CYP90D1 medium borderline
Potra003231g21077.1 Steroid CYP90D1 low borderline
Potra003231g21077.2 Steroid CYP90D1 low borderline
Potra003231g21077.3 Steroid CYP90D1 low borderline
Potra003245g21121.1 Steroid CYP90D1 medium borderline
Potra003245g21121.2 Steroid CYP90D1 medium borderline