PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Potra000973g08038.1 Steroid DWF4/CYP90B1 low borderline
Potra000973g08038.2 Steroid DWF4/CYP90B1 low borderline
Potra001037g08746.2 Steroid DWF4/CYP90B1 low borderline
Potra001165g10110.1 Steroid DWF4/CYP90B1 low borderline
Potra001274g11006.1 Steroid DWF4/CYP90B1 low borderline
Potra001285g11088.1 Steroid DWF4/CYP90B1 low borderline
Potra001334g11457.1 Steroid DWF4/CYP90B1 medium borderline
Potra001357g11626.1 Steroid DWF4/CYP90B1 low borderline
Potra001613g13292.3 Steroid DWF4/CYP90B1 medium borderline
Potra001613g13292.4 Steroid DWF4/CYP90B1 medium borderline
Potra001645g13492.4 Steroid DWF4/CYP90B1 medium borderline
Potra001762g14330.1 Steroid DWF4/CYP90B1 medium borderline
Potra001804g14599.1 Steroid DWF4/CYP90B1 low borderline
Potra001813g14649.1 Steroid DWF4/CYP90B1 low borderline
Potra001907g15128.1 Steroid DWF4/CYP90B1 low borderline
Potra001907g15128.2 Steroid DWF4/CYP90B1 low borderline
Potra001965g15510.1 Steroid DWF4/CYP90B1 low borderline
Potra001965g15510.2 Steroid DWF4/CYP90B1 low borderline
Potra001965g15511.1 Steroid DWF4/CYP90B1 low borderline
Potra001965g15513.1 Steroid DWF4/CYP90B1 low borderline
Potra002011g15767.5 Steroid DWF4/CYP90B1 medium borderline
Potra002021g15846.1 Steroid DWF4/CYP90B1 medium borderline
Potra002021g15846.2 Steroid DWF4/CYP90B1 medium borderline
Potra002099g16332.1 Steroid DWF4/CYP90B1 low borderline
Potra002099g16332.2 Steroid DWF4/CYP90B1 low borderline
Potra002129g16502.1 Steroid DWF4/CYP90B1 medium borderline
Potra002139g16564.1 Steroid DWF4/CYP90B1 medium borderline
Potra002148g16622.1 Steroid DWF4/CYP90B1 low borderline
Potra002169g16741.6 Steroid DWF4/CYP90B1 low borderline
Potra002169g16741.8 Steroid DWF4/CYP90B1 low borderline
Potra002203g16962.1 Steroid DWF4/CYP90B1 low borderline
Potra002322g17764.1 Steroid DWF4/CYP90B1 low borderline
Potra002334g17841.1 Steroid DWF4/CYP90B1 low borderline
Potra002411g18340.3 Steroid DWF4/CYP90B1 medium borderline
Potra002411g18340.4 Steroid DWF4/CYP90B1 medium borderline
Potra002497g18861.3 Steroid DWF4/CYP90B1 low borderline
Potra002497g18861.5 Steroid DWF4/CYP90B1 low borderline
Potra002516g18979.1 Steroid DWF4/CYP90B1 low borderline
Potra002556g19264.1 Steroid DWF4/CYP90B1 low borderline
Potra002556g19264.2 Steroid DWF4/CYP90B1 low borderline
Potra002640g19633.1 Steroid DWF4/CYP90B1 low borderline
Potra002696g19781.1 Steroid DWF4/CYP90B1 low borderline
Potra002913g20293.2 Steroid DWF4/CYP90B1 low borderline
Potra002934g20340.1 Steroid DWF4/CYP90B1 low borderline
Potra003058g20643.1 Steroid DWF4/CYP90B1 low borderline
Potra003058g20643.2 Steroid DWF4/CYP90B1 low borderline
Potra003101g20744.3 Steroid DWF4/CYP90B1 medium borderline
Potra003114g20768.1 Steroid DWF4/CYP90B1 low borderline
Potra003114g20770.1 Steroid DWF4/CYP90B1 low borderline
Potra003179g20912.1 Steroid DWF4/CYP90B1 low borderline