PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Potra000928g07560.1 Flavonoid F3H medium borderline
Potra000928g07560.2 Flavonoid F3H medium borderline
Potra000959g07878.1 Flavonoid F3H medium borderline
Potra001064g09135.1 Flavonoid F3H medium borderline
Potra001064g09135.2 Flavonoid F3H medium borderline
Potra001064g09135.3 Flavonoid F3H medium borderline
Potra001064g09135.4 Flavonoid F3H medium borderline
Potra001094g09530.1 Flavonoid F3H medium borderline
Potra001094g09530.2 Flavonoid F3H medium borderline
Potra001094g09530.3 Flavonoid F3H medium borderline
Potra001105g09661.1 Flavonoid F3H low borderline
Potra001147g09990.1 Flavonoid F3H medium borderline
Potra001147g09990.2 Flavonoid F3H medium borderline
Potra001147g09990.3 Flavonoid F3H medium borderline
Potra001147g09990.4 Flavonoid F3H medium borderline
Potra001166g10111.1 Flavonoid F3H medium borderline
Potra001166g10111.2 Flavonoid F3H medium borderline
Potra001166g10111.3 Flavonoid F3H medium borderline
Potra001195g10332.1 Flavonoid F3H medium borderline
Potra001195g10332.2 Flavonoid F3H medium borderline
Potra001195g10332.3 Flavonoid F3H medium pass
Potra001205g10410.1 Flavonoid F3H medium borderline
Potra001205g10417.1 Flavonoid F3H medium borderline
Potra001205g10418.1 Flavonoid F3H medium borderline
Potra001205g10418.2 Flavonoid F3H medium borderline
Potra001205g10419.1 Flavonoid F3H medium borderline
Potra001205g10419.2 Flavonoid F3H medium borderline
Potra001205g10420.1 Flavonoid F3H medium borderline
Potra001209g10468.1 Flavonoid F3H medium borderline
Potra001255g10804.1 Flavonoid F3H low borderline
Potra001255g10804.2 Flavonoid F3H medium borderline
Potra001255g10804.3 Flavonoid F3H medium borderline
Potra001269g10963.1 Flavonoid F3H medium borderline
Potra001269g10963.2 Flavonoid F3H medium pass
Potra001355g11612.1 Flavonoid F3H medium borderline
Potra001355g11612.2 Flavonoid F3H medium borderline
Potra001388g11816.1 Flavonoid F3H low borderline
Potra001388g11816.2 Flavonoid F3H low borderline
Potra001388g11816.3 Flavonoid F3H low borderline
Potra001395g11860.1 Flavonoid F3H medium borderline
Potra001412g11979.1 Flavonoid F3H low borderline
Potra001453g12221.1 Flavonoid F3H medium borderline
Potra001453g12221.2 Flavonoid F3H medium borderline
Potra001453g12221.3 Flavonoid F3H medium borderline
Potra001453g12223.1 Flavonoid F3H medium pass
Potra001453g12230.1 Flavonoid F3H medium borderline
Potra001453g12230.2 Flavonoid F3H medium borderline
Potra001453g12230.3 Flavonoid F3H medium borderline
Potra001453g12230.4 Flavonoid F3H medium borderline
Potra001483g12391.1 Flavonoid F3H low borderline