PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Potra002794g19983.3 Flavonoid F3H medium borderline
Potra003126g20808.1 Flavonoid F3H medium borderline
Potra003135g20820.1 Flavonoid F3H medium borderline
Potra003214g21017.1 Flavonoid F3H low borderline
Potra003214g21017.2 Flavonoid F3H low borderline
Potra003223g21057.1 Flavonoid F3H low borderline
Potra003336g21384.1 Flavonoid F3H medium borderline
Potra003504g21841.1 Flavonoid F3H medium borderline
Potra003505g21843.1 Flavonoid F3H medium borderline
Potra003524g21895.1 Flavonoid F3H low borderline
Potra003524g21895.2 Flavonoid F3H low borderline
Potra003524g21895.3 Flavonoid F3H low borderline
Potra003524g21895.4 Flavonoid F3H low borderline
Potra003594g22108.1 Flavonoid F3H medium borderline
Potra003594g22108.2 Flavonoid F3H medium borderline
Potra003594g22108.3 Flavonoid F3H medium borderline
Potra003656g22324.1 Flavonoid F3H medium borderline
Potra003656g22324.2 Flavonoid F3H medium borderline
Potra003656g22324.3 Flavonoid F3H medium borderline
Potra003656g22325.1 Flavonoid F3H medium borderline
Potra003656g22325.2 Flavonoid F3H medium borderline
Potra003656g22325.3 Flavonoid F3H medium borderline
Potra003656g22325.4 Flavonoid F3H medium borderline
Potra003786g22859.1 Flavonoid F3H medium borderline
Potra003786g22859.2 Flavonoid F3H medium borderline
Potra003849g23146.1 Flavonoid F3H medium borderline
Potra003849g23146.2 Flavonoid F3H medium borderline
Potra003936g23629.1 Flavonoid F3H medium borderline
Potra003960g23772.1 Flavonoid F3H medium borderline
Potra003960g23772.2 Flavonoid F3H medium borderline
Potra003968g23830.1 Flavonoid F3H medium borderline
Potra003974g23895.1 Flavonoid F3H medium borderline
Potra003974g23895.2 Flavonoid F3H medium borderline
Potra003993g24043.1 Flavonoid F3H medium borderline
Potra003993g24043.2 Flavonoid F3H medium borderline
Potra004028g24342.1 Flavonoid F3H low borderline
Potra004028g24342.2 Flavonoid F3H low borderline
Potra004347g24835.1 Flavonoid F3H medium borderline
Potra004347g24835.2 Flavonoid F3H medium borderline
Potra004485g24974.1 Flavonoid F3H medium borderline
Potra004485g24974.2 Flavonoid F3H medium borderline
Potra004509g25008.1 Flavonoid F3H medium borderline
Potra004509g25008.2 Flavonoid F3H medium borderline
Potra004509g25008.3 Flavonoid F3H medium borderline
Potra004572g25081.1 Flavonoid F3H medium borderline
Potra005601g25438.1 Flavonoid F3H medium borderline
Potra005601g25438.2 Flavonoid F3H medium borderline
Potra010281g26550.1 Flavonoid F3H medium borderline
Potra169793g27467.1 Flavonoid F3H low borderline
Potra169793g27467.2 Flavonoid F3H low borderline