PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Potra000121g00397.1 Flavonoid IFR high pass
Potra000121g00397.2 Flavonoid IFR high pass
Potra000121g00397.3 Flavonoid IFR high pass
Potra000121g00397.4 Flavonoid IFR high pass
Potra000121g00397.5 Flavonoid IFR high pass
Potra000121g00397.6 Flavonoid IFR high pass
Potra000121g00397.7 Flavonoid IFR medium pass
Potra000121g00397.8 Flavonoid IFR medium pass
Potra000121g00397.9 Flavonoid IFR medium pass
Potra000406g01980.1 Flavonoid IFR medium pass
Potra000443g02454.1 Flavonoid IFR high pass
Potra000443g02454.2 Flavonoid IFR high pass
Potra000443g02454.3 Flavonoid IFR medium pass
Potra000472g02850.1 Flavonoid IFR low borderline
Potra000472g02850.2 Flavonoid IFR low borderline
Potra000546g03889.1 Flavonoid IFR medium pass
Potra000736g05807.1 Flavonoid IFR low borderline
Potra000828g06637.1 Flavonoid IFR low borderline
Potra000839g06771.1 Flavonoid IFR low borderline
Potra000839g06771.2 Flavonoid IFR low borderline
Potra000839g06771.3 Flavonoid IFR low borderline
Potra000839g06771.4 Flavonoid IFR low borderline
Potra000892g07226.1 Flavonoid IFR high pass
Potra000931g07594.1 Flavonoid IFR low borderline
Potra000931g07594.2 Flavonoid IFR low borderline
Potra000931g07594.4 Flavonoid IFR low borderline
Potra000934g07626.1 Flavonoid IFR low borderline
Potra000934g07626.2 Flavonoid IFR low borderline
Potra000934g07626.3 Flavonoid IFR low borderline
Potra000934g07626.4 Flavonoid IFR low borderline
Potra000934g07626.5 Flavonoid IFR low borderline
Potra000942g35543.1 Flavonoid IFR medium pass
Potra000980g08117.1 Flavonoid IFR low borderline
Potra000980g08117.2 Flavonoid IFR low borderline
Potra000980g08117.3 Flavonoid IFR low borderline
Potra000980g08117.4 Flavonoid IFR low borderline
Potra001056g09043.1 Flavonoid IFR low borderline
Potra001056g09043.2 Flavonoid IFR low borderline
Potra001056g09043.3 Flavonoid IFR low borderline
Potra001056g09043.4 Flavonoid IFR low borderline
Potra001265g10927.1 Flavonoid IFR low borderline
Potra001265g10927.2 Flavonoid IFR low borderline
Potra001597g13192.1 Flavonoid IFR low borderline
Potra001597g13192.2 Flavonoid IFR low borderline
Potra001597g13192.3 Flavonoid IFR low borderline
Potra001597g13192.4 Flavonoid IFR low borderline
Potra001883g14993.6 Flavonoid IFR low borderline
Potra001883g14993.7 Flavonoid IFR low borderline
Potra001883g14993.8 Flavonoid IFR low borderline
Potra001960g15482.1 Flavonoid IFR low borderline