PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Potra001960g15482.2 Flavonoid IFR low borderline
Potra002175g16780.1 Flavonoid IFR low borderline
Potra002175g16780.2 Flavonoid IFR low borderline
Potra002175g16780.3 Flavonoid IFR low borderline
Potra002175g16780.4 Flavonoid IFR low borderline
Potra002175g16780.5 Flavonoid IFR low borderline
Potra002175g16780.6 Flavonoid IFR low borderline
Potra002175g16780.7 Flavonoid IFR low borderline
Potra002175g16780.8 Flavonoid IFR low borderline
Potra002175g33749.1 Flavonoid IFR low borderline
Potra002239g17208.1 Flavonoid IFR low borderline
Potra002239g17208.2 Flavonoid IFR low borderline
Potra002239g17208.3 Flavonoid IFR low borderline
Potra002282g17490.1 Flavonoid IFR medium pass
Potra002282g17490.2 Flavonoid IFR medium pass
Potra002282g17490.3 Flavonoid IFR low borderline
Potra002282g17490.4 Flavonoid IFR low borderline
Potra002383g18146.1 Flavonoid IFR low borderline
Potra002383g18146.2 Flavonoid IFR low borderline
Potra002383g18146.3 Flavonoid IFR low borderline
Potra002383g18146.4 Flavonoid IFR low borderline
Potra002388g18184.1 Flavonoid IFR high pass
Potra002388g18184.2 Flavonoid IFR high pass
Potra002388g18184.3 Flavonoid IFR high pass
Potra002406g18301.1 Flavonoid IFR high pass
Potra002406g18301.2 Flavonoid IFR high pass
Potra002413g18361.1 Flavonoid IFR high pass
Potra002459g18637.1 Flavonoid IFR low borderline
Potra002459g18637.2 Flavonoid IFR low borderline
Potra002459g18637.3 Flavonoid IFR low borderline
Potra002459g18637.4 Flavonoid IFR low borderline
Potra002459g18637.5 Flavonoid IFR low borderline
Potra002459g18637.6 Flavonoid IFR low borderline
Potra002459g18637.7 Flavonoid IFR low borderline
Potra002472g18705.2 Flavonoid IFR low borderline
Potra002506g18929.1 Flavonoid IFR medium pass
Potra002641g19639.1 Flavonoid IFR medium pass
Potra002943g20363.10 Flavonoid IFR low borderline
Potra002943g20363.9 Flavonoid IFR low borderline
Potra003184g20924.1 Flavonoid IFR low borderline
Potra003682g22422.1 Flavonoid IFR high pass
Potra003682g22423.1 Flavonoid IFR high pass
Potra003682g22423.2 Flavonoid IFR high pass
Potra003682g22424.1 Flavonoid IFR high pass
Potra003682g22424.2 Flavonoid IFR high pass
Potra003837g23061.1 Flavonoid IFR low borderline
Potra003837g23061.2 Flavonoid IFR low borderline
Potra003837g23061.3 Flavonoid IFR low borderline
Potra003837g23061.4 Flavonoid IFR low borderline
Potra003848g23133.1 Flavonoid IFR low borderline