PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
Reset
Gene Pathway Family Confidence Status
Potra000138g00478.1 Flavonoid IFS low borderline
Potra000148g00519.1 Flavonoid IFS medium borderline
Potra000158g00569.1 Flavonoid IFS medium borderline
Potra000175g00665.1 Flavonoid IFS low borderline
Potra000180g00706.1 Flavonoid IFS low borderline
Potra000180g00706.2 Flavonoid IFS low borderline
Potra000180g00706.3 Flavonoid IFS low borderline
Potra000180g00706.4 Flavonoid IFS low borderline
Potra000341g01173.1 Flavonoid IFS low borderline
Potra000341g01173.2 Flavonoid IFS low borderline
Potra000341g01173.3 Flavonoid IFS low borderline
Potra000344g01217.1 Flavonoid IFS low borderline
Potra000344g01217.2 Flavonoid IFS low borderline
Potra000370g01539.1 Flavonoid IFS low borderline
Potra000387g01755.1 Flavonoid IFS low borderline
Potra000432g02300.2 Flavonoid IFS low borderline
Potra000432g02302.1 Flavonoid IFS low borderline
Potra000458g02654.1 Flavonoid IFS low borderline
Potra000508g03331.1 Flavonoid IFS low borderline
Potra000508g03331.2 Flavonoid IFS low borderline
Potra000542g03822.1 Flavonoid IFS low borderline
Potra000542g03822.2 Flavonoid IFS low borderline
Potra000542g03822.5 Flavonoid IFS low borderline
Potra000601g04563.1 Flavonoid IFS low borderline
Potra000601g04563.2 Flavonoid IFS low borderline
Potra000633g04834.3 Flavonoid IFS low borderline
Potra000655g05045.1 Flavonoid IFS medium borderline
Potra000663g05121.1 Flavonoid IFS low borderline
Potra000683g05292.1 Flavonoid IFS low borderline
Potra000685g05310.1 Flavonoid IFS medium borderline
Potra000701g05464.1 Flavonoid IFS low borderline
Potra000701g05464.2 Flavonoid IFS low borderline
Potra000701g05464.3 Flavonoid IFS low borderline
Potra000701g05464.4 Flavonoid IFS low borderline
Potra000701g05464.5 Flavonoid IFS low borderline
Potra000701g05465.1 Flavonoid IFS low borderline
Potra000701g05465.2 Flavonoid IFS low borderline
Potra000701g05465.3 Flavonoid IFS low borderline
Potra000701g05466.1 Flavonoid IFS medium borderline
Potra000701g05467.1 Flavonoid IFS medium borderline
Potra000726g05681.1 Flavonoid IFS low borderline
Potra000726g05683.1 Flavonoid IFS low borderline
Potra000726g05683.2 Flavonoid IFS low borderline
Potra000729g05721.1 Flavonoid IFS medium borderline
Potra000729g05722.1 Flavonoid IFS medium borderline
Potra000729g05723.1 Flavonoid IFS medium borderline
Potra000729g05723.2 Flavonoid IFS medium borderline
Potra000730g05751.1 Flavonoid IFS low borderline
Potra000733g05782.1 Flavonoid IFS low borderline
Potra000803g06374.1 Flavonoid IFS low borderline