PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
Potra000820g06544.1 Flavonoid IFS medium borderline
Potra000820g06544.2 Flavonoid IFS medium borderline
Potra000820g06544.3 Flavonoid IFS medium borderline
Potra000828g06627.1 Flavonoid IFS low borderline
Potra000828g06627.2 Flavonoid IFS low borderline
Potra000841g06786.1 Flavonoid IFS low borderline
Potra000854g06913.1 Flavonoid IFS medium borderline
Potra000863g06975.1 Flavonoid IFS medium borderline
Potra000863g06975.2 Flavonoid IFS medium borderline
Potra000868g06995.1 Flavonoid IFS low borderline
Potra000868g06995.2 Flavonoid IFS low borderline
Potra000876g07055.1 Flavonoid IFS low borderline
Potra000876g07056.1 Flavonoid IFS low borderline
Potra000971g08018.1 Flavonoid IFS medium borderline
Potra000973g08038.2 Flavonoid IFS low borderline
Potra001027g08594.1 Flavonoid IFS medium borderline
Potra001037g08746.1 Flavonoid IFS low borderline
Potra001037g08746.2 Flavonoid IFS low borderline
Potra001048g08911.1 Flavonoid IFS medium borderline
Potra001055g09032.1 Flavonoid IFS medium borderline
Potra001056g09046.1 Flavonoid IFS medium borderline
Potra001094g09520.1 Flavonoid IFS low borderline
Potra001094g09520.2 Flavonoid IFS low borderline
Potra001102g09616.1 Flavonoid IFS medium borderline
Potra001160g10064.1 Flavonoid IFS low borderline
Potra001174g10171.1 Flavonoid IFS low borderline
Potra001174g10171.2 Flavonoid IFS low borderline
Potra001174g10171.3 Flavonoid IFS low borderline
Potra001174g10171.4 Flavonoid IFS low borderline
Potra001174g10171.5 Flavonoid IFS low borderline
Potra001174g10171.6 Flavonoid IFS low borderline
Potra001174g10171.7 Flavonoid IFS low borderline
Potra001196g10348.1 Flavonoid IFS low borderline
Potra001196g10348.2 Flavonoid IFS low borderline
Potra001274g11006.1 Flavonoid IFS low borderline
Potra001274g11009.1 Flavonoid IFS medium borderline
Potra001274g11009.2 Flavonoid IFS medium borderline
Potra001285g11089.1 Flavonoid IFS medium borderline
Potra001324g11373.1 Flavonoid IFS low borderline
Potra001334g11457.1 Flavonoid IFS low borderline
Potra001357g11626.1 Flavonoid IFS low borderline
Potra001455g12249.1 Flavonoid IFS low borderline
Potra001513g12618.1 Flavonoid IFS low borderline
Potra001513g12618.2 Flavonoid IFS low borderline
Potra001581g13071.1 Flavonoid IFS low borderline
Potra001585g13100.1 Flavonoid IFS medium borderline
Potra001585g13100.2 Flavonoid IFS medium borderline
Potra001585g13101.1 Flavonoid IFS low borderline
Potra001585g13102.1 Flavonoid IFS low borderline
Potra001613g13292.1 Flavonoid IFS low borderline