PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
Potra001613g13292.2 Flavonoid IFS low borderline
Potra001613g13292.3 Flavonoid IFS low borderline
Potra001613g13292.4 Flavonoid IFS low borderline
Potra001645g13492.1 Flavonoid IFS low borderline
Potra001645g13492.2 Flavonoid IFS low borderline
Potra001645g13492.3 Flavonoid IFS low borderline
Potra001645g13492.4 Flavonoid IFS low borderline
Potra001647g13503.1 Flavonoid IFS medium borderline
Potra001762g14330.1 Flavonoid IFS low borderline
Potra001801g14583.1 Flavonoid IFS low borderline
Potra001804g14599.1 Flavonoid IFS medium borderline
Potra001813g14649.1 Flavonoid IFS medium borderline
Potra001876g14979.1 Flavonoid IFS low borderline
Potra001876g14979.2 Flavonoid IFS low borderline
Potra001907g15129.1 Flavonoid IFS medium borderline
Potra001965g15510.1 Flavonoid IFS medium borderline
Potra001965g15510.2 Flavonoid IFS medium borderline
Potra001965g15511.1 Flavonoid IFS medium borderline
Potra001965g15513.1 Flavonoid IFS medium borderline
Potra002011g15767.1 Flavonoid IFS low borderline
Potra002011g15767.2 Flavonoid IFS low borderline
Potra002011g15767.3 Flavonoid IFS low borderline
Potra002011g15767.4 Flavonoid IFS low borderline
Potra002011g15767.5 Flavonoid IFS low borderline
Potra002011g15767.6 Flavonoid IFS low borderline
Potra002021g15846.1 Flavonoid IFS low borderline
Potra002021g15846.2 Flavonoid IFS low borderline
Potra002099g16332.1 Flavonoid IFS medium borderline
Potra002118g16447.1 Flavonoid IFS low borderline
Potra002122g16460.1 Flavonoid IFS medium borderline
Potra002129g16502.1 Flavonoid IFS low borderline
Potra002129g16502.2 Flavonoid IFS low borderline
Potra002139g16572.1 Flavonoid IFS medium borderline
Potra002140g16581.1 Flavonoid IFS medium borderline
Potra002148g16621.1 Flavonoid IFS low borderline
Potra002169g16741.6 Flavonoid IFS low borderline
Potra002169g16741.8 Flavonoid IFS low borderline
Potra002334g17841.1 Flavonoid IFS low borderline
Potra002411g18340.1 Flavonoid IFS low borderline
Potra002411g18340.2 Flavonoid IFS low borderline
Potra002411g18340.3 Flavonoid IFS low borderline
Potra002411g18340.4 Flavonoid IFS low borderline
Potra002448g18542.1 Flavonoid IFS medium borderline
Potra002497g18861.3 Flavonoid IFS low borderline
Potra002516g18979.1 Flavonoid IFS low borderline
Potra002537g19112.1 Flavonoid IFS low borderline
Potra002556g19264.1 Flavonoid IFS low borderline
Potra002556g19264.2 Flavonoid IFS low borderline
Potra002642g19640.2 Flavonoid IFS medium borderline
Potra002696g19781.1 Flavonoid IFS medium borderline