PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
Potra002003g15730.2 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002003g15730.3 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002011g15774.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra002214g17045.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002214g17045.2 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002316g17666.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Potra002316g17667.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Potra002323g17770.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra002749g19898.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002749g19898.2 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002749g19898.3 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002799g19999.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra002799g19999.2 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra002844g20113.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002844g20113.2 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002844g20113.3 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002950g20378.1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002950g20378.2 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002950g20378.3 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002950g20378.4 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002950g20378.5 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002950g20378.6 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002950g20378.7 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra003460g21739.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003460g21739.2 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003460g21739.3 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003460g21739.4 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003460g21739.5 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003577g22068.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Potra003577g22068.2 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Potra003577g22068.3 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Potra003577g22068.4 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Potra003765g22752.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra003765g22753.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra003789g22867.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra003789g22867.2 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra003967g23820.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003967g23820.2 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003967g23820.3 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003967g23820.4 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003994g24044.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra004602g25106.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra004602g25106.2 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra006306g25646.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra188950g28648.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra189935g28732.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Potra198448g29318.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH